RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TRIM7Q9C029 511 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MIS12Q9H081 205 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MMP28Q9H239 520 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 PIGMQ9H3S5 423 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 MRPL47Q9HD33 250 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 MRPL17Q9NRX2 175 aaKnown RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 ABCF3Q9NUQ8 709 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 PARVAQ9NVD7 372 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 COMMD8Q9NX08 183 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CORO1CQ9ULV4 474 aaPredicted RBP4.06□□□□□ -1.76
CLK1-203ENST00000409769 GUCA1BQ9UMX6 200 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 KLHL20Q9Y2M5 609 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 OR2W1Q9Y3N9 320 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 SESN1Q9Y6P5 492 aa4.06□□□□□ -1.76
CLK1-203ENST00000409769 CHD5Q8TDI0 1954 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 NUP210Q8TEM1 1887 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 KIF2AO00139 706 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 TNRC18O15417 2968 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 BUD23O43709 281 aaKnown RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 KIF5CO60282 957 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 HSF2BPO75031 334 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 TMCC2O75069 709 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PTP4A3O75365 173 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PALMO75781 387 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PROSCO94903 275 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 CXCL14O95715 111 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 IGLV3-25P01717 112 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 FYNP06241 537 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ZDHHC11BP0C7U3 371 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 KRT3P12035 628 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 RARGP13631 454 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 HMGA1P17096 107 aaKnown RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 POLR2CP19387 275 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 SLC1A1P43005 524 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 TUFMP49411 452 aaKnown RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 HOXA1P49639 335 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 PGFP49763 221 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 CLCN4P51793 760 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 GPR143P51810 404 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ARPP19P56211 112 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SLC8A3P57103 927 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SNX16P57768 344 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 GNG11P61952 73 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ADIGQ0VDE8 80 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 GPM6BQ13491 265 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 EIF4EBP2Q13542 120 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 KCNC3Q14003 757 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 CCDC14Q49A88 953 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SDHAF4Q5VUM1 108 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 IRAK1BP1Q5VVH5 260 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 OR6B2Q6IFH4 312 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 DNAJC24Q6P3W2 148 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 GDPD4Q6W3E5 623 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SYT10Q6XYQ8 523 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 TPRG1Q6ZUI0 275 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 DENND5BQ6ZUT9 1274 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PLEKHM3Q6ZWE6 761 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SCD5Q86SK9 330 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PHLDB2Q86SQ0 1253 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SDCCAG8Q86SQ7 713 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 EPHX4Q8IUS5 362 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 MAP7D3Q8IWC1 876 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 PM20D2Q8IYS1 436 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 NUP93Q8N1F7 819 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 EMC1Q8N766 993 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 HJURPQ8NCD3 748 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 STKLD1Q8NE28 680 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 OR8K5Q8NH50 307 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 HM13Q8TCT9 377 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 UBE2Q2Q8WVN8 375 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 NDRG1Q92597 394 aaKnown RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 NT5C3BQ969T7 300 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SCRN2Q96FV2 425 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 MCEEQ96PE7 176 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ULBP1Q9BZM6 244 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 GOLPH3Q9H4A6 298 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 LRRC4Q9HBW1 653 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 RRAGDQ9NQL2 400 aaPredicted RBP4.05□□□□□ -1.76
CLK1-203ENST00000409769 KRT84Q9NSB2 600 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 CHD7Q9P2D1 2997 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 POLG2Q9UHN1 485 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 LCMT1Q9UIC8 334 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ANAPC7Q9UJX3 599 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 SCML2Q9UQR0 700 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 YIPF1Q9Y548 306 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 ALG6Q9Y672 507 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 NUP205Q92621 2012 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 DENND4AQ7Z401 1863 aa4.05□□□□□ -1.76
CLK1-203ENST00000409769 YJEFN3A6XGL0 299 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 ANKRD66B4E2M5 251 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 E7ENQ6 273 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 GOLGA8SH3BPF8 625 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 OGG1O15527 345 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 HS6ST1O60243 411 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 LRCH4O75427 683 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 GRAP2O75791 330 aa4.04□□□□□ -1.76
CLK1-203ENST00000409769 OLFM2O95897 454 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms