RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ULK4Q96C45 1275 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 PGAP3Q96FM1 320 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 ITCHQ96J02 903 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 SENP8Q96LD8 212 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 CPPED1Q9BRF8 314 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 WACQ9BTA9 647 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 THUMPD3Q9BV44 507 aaKnown RBP10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 CD244Q9BZW8 370 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 DERL2Q9GZP9 239 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 PIF1Q9H611 641 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 ZNF275Q9NSD4 429 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 PDP1Q9P0J1 537 aaPredicted RBP10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 UTS2RQ9UKP6 389 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 IKZF3Q9UKT9 509 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 HCFC2Q9Y5Z7 792 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 ACTL7AQ9Y615 435 aa10.22□□□□□ -0.77
NIF3L1-204ENST00000409357 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.77
NIF3L1-204ENST00000409357 MUC6Q6W4X9 2439 aa10.21□□□□□ -0.77
NIF3L1-204ENST00000409357 MIA3Q5JRA6 1907 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 WDR87Q6ZQQ6 2873 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FAM240BA0A1B0GVZ2 78 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CIB4A0PJX0 185 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CASTOR2A6NHX0 329 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 INMT-MINDY4F8WBC2 141 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 PCDH17O14917 1159 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FABP7O15540 132 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 LYRM1O43325 122 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CHP2O43745 196 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CXCL14O95715 111 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 EFEMP2O95967 443 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FABP3P05413 133 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 STSP08842 583 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CTSAP10619 480 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CTPS1P17812 591 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 TSPAN8P19075 237 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CALCRP30988 508 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 EVI2BP34910 448 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CASP2P42575 452 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 SULT1E1P49888 294 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 RAG2P55895 527 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 OSTNP61366 133 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ST3GAL4Q11206 333 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 SOWAHCQ53LP3 525 aaPredicted RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FAM171A1Q5VUB5 890 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FCRLBQ6BAA4 426 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 LIPIQ6XZB0 460 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 MACC1Q6ZN28 852 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ZNF704Q6ZNC4 412 aaPredicted RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 EIF3MQ7L2H7 374 aaKnown RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 NLRP8Q86W28 1048 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 BBS7Q8IWZ6 715 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 PHC2Q8IXK0 858 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 MSRB3Q8IXL7 192 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CRYBG2Q8N1P7 616 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 UXS1Q8NBZ7 420 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC37A3Q8NCC5 494 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 OR2T11Q8NH01 316 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 NETO1Q8TDF5 533 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 HASPINQ8TF76 798 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ELMO1Q92556 727 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 UCN3Q969E3 161 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 INTS12Q96CB8 462 aaKnown RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 PPP3R2Q96LZ3 170 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FAM193BQ96PV7 902 aaPredicted RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 RTP3Q9BQQ7 232 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC19A3Q9BZV2 496 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 CDT1Q9H211 546 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 KCNH6Q9H252 994 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 TNKS2Q9H2K2 1166 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 EPHX3Q9H6B9 360 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 REEP1Q9H902 201 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 GLOD4Q9HC38 313 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ATP13A1Q9HD20 1204 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FANCFQ9NPI8 374 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 TRPM5Q9NZQ8 1165 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 FNIP2Q9P278 1114 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 RIMKLBQ9ULI2 386 aa10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ZNF490Q9ULM2 529 aaPredicted RBP10.21□□□□□ -0.78
NIF3L1-204ENST00000409357 ZDBF2Q9HCK1 2354 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 DOCK6Q96HP0 2047 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 LILRB3O75022 631 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 PROS1P07225 676 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 TSPAN19P0C672 248 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 ANXA3P12429 323 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 CYP4B1P13584 511 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 ANXA8P13928 327 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 EPCAMP16422 314 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 HOXB9P17482 250 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 CD96P40200 585 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 CRYBB2P43320 205 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 HAAOP46952 286 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 CCT3P49368 545 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 HOXC5Q00444 222 aa10.2□□□□□ -0.78
NIF3L1-204ENST00000409357 ACVR1Q04771 509 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms