RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 MR1Q95460 341 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 GFM2Q969S9 779 aaKnown RBP13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 EGLN2Q96KS0 407 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 CSF3RQ99062 836 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 MAPKAP1Q9BPZ7 522 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 CTSFQ9UBX1 484 aa13.35□□□□□ -0.27
CHRNA1-204ENST00000409323 A0A0A6YYD5 115 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 WASHC1A8K0Z3 465 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 MEN1O00255 615 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 CHST10O43529 356 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 B3GALT2O43825 422 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 SEMA3DO95025 777 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 LRATO95237 230 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NSA2O95478 260 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ALDOCP09972 364 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ALOX15P16050 662 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 FBLP22087 321 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 AVPR1BP47901 424 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 DIO3P55073 304 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ZNF33BQ06732 778 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TGM3Q08188 693 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ABHD18Q0P651 414 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM53BQ14153 422 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TGIF1Q15583 401 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 SPIN4Q56A73 249 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 IL23RQ5VWK5 629 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 MLIPQ5VWP3 458 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ZNF385CQ66K41 422 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 C18orf63Q68DL7 685 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NOXRED1Q6NXP6 359 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 CYP20A1Q6UW02 462 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 RNF165Q6ZSG1 346 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 LARP4Q71RC2 724 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 DSELQ8IZU8 1212 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NAF1Q96HR8 494 aaKnown RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 PPP3R2Q96LZ3 170 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NRSN2Q9GZP1 204 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 CHST8Q9H2A9 424 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 ZNF304Q9HCX3 659 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 NMRK1Q9NWW6 199 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 PCDHGA3Q9Y5H0 932 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 AKAP13Q12802 2813 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 CROCCQ5TZA2 2017 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 AHCTF1Q8WYP5 2266 aa13.34□□□□□ -0.27
CHRNA1-204ENST00000409323 GLOD5A6NK44 160 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 C9JVG2 144 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 TGDSO95455 350 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 DLGAP3O95886 979 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 ANXA4P09525 319 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 LBPP18428 481 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 HNRNPFP52597 415 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 MAPK12P53778 367 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 LIM2P55344 173 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 MC1RQ01726 317 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 NKAIN1Q4KMZ8 207 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 VWA2Q5GFL6 755 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 FAM180BQ6P0A1 224 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 C6orf15Q6UXA7 325 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 KIRREL3Q8IZU9 778 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 CA13Q8N1Q1 262 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 LIX1Q8N485 282 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 TMEM52Q8NDY8 209 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 SRFBP1Q8NEF9 429 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 OR51Q1Q8NH59 317 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 C11orf24Q96F05 449 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 MAELQ96JY0 434 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 RILPQ96NA2 401 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 DDX31Q9H8H2 851 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 TCF7L2Q9NQB0 619 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 C5AR2Q9P296 337 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.28
CHRNA1-204ENST00000409323 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 NDUFAB1O14561 156 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 NVLO15381 856 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 AKAP10O43572 662 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 B4GALT2O60909 372 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 KLK3P07288 261 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 ADRB1P08588 477 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 FAM58BPP0C7Q3 252 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 PRR35P0CG20 571 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 SDC1P18827 310 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 PRPH2P23942 346 aa13.32□□□□□ -0.28
CHRNA1-204ENST00000409323 XCR1P46094 333 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms