RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PPP2R1BP30154 601 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 ASCL1P50553 236 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 DAZAP2Q15038 168 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-203ENST00000409225 TERF2Q15554 542 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF470Q6ECI4 717 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 ZNF549Q6P9A3 640 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 NT5CQ8TCD5 201 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 CD200R1Q8TD46 325 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 KCNJ9Q92806 393 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 LRRC46Q96FV0 321 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 SH3GL2Q99962 352 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 SGPP1Q9BX95 441 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 FRMD8P1Q9BZ68 369 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-203ENST00000409225 PDE10AQ9Y233 779 aa15.46■□□□□ 0.07
CHMP3-203ENST00000409225 TRBC2A0A5B9 178 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 HSPB2A8KAH6 182 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 FAM171A2A8MVW0 826 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 AP3B1O00203 1094 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 WWP2O00308 870 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 SUSD5O60279 629 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 AVILO75366 819 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 CNR1P21554 472 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 CCND1P24385 295 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 DNASE1L1P49184 302 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 DCAF7P61962 342 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 NKX6-1P78426 367 aaPredicted RBP15.45■□□□□ 0.06
CHMP3-203ENST00000409225 SLC10A1Q14973 349 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 PCBP2Q15366 365 aaKnown RBP eCLIP15.45■□□□□ 0.066e-7■■■■■ 44.5
CHMP3-203ENST00000409225 HSPB2Q16082 182 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 FAM47EQ6ZV65 393 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 CXXC5Q7LFL8 322 aaKnown RBP15.45■□□□□ 0.06
CHMP3-203ENST00000409225 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 CA13Q8N1Q1 262 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 TBC1D19Q8N5T2 526 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 ABHD11Q8NFV4 315 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 RNASE6Q93091 150 aaKnown RBP15.45■□□□□ 0.06
CHMP3-203ENST00000409225 RASL10BQ96S79 203 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 HAUS8Q9BT25 410 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 PLEKHF2Q9H8W4 249 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 TRMT1Q9NXH9 659 aaKnown RBP15.45■□□□□ 0.06
CHMP3-203ENST00000409225 SPRR3Q9UBC9 169 aa15.45■□□□□ 0.06
CHMP3-203ENST00000409225 REXO2Q9Y3B8 237 aaKnown RBP15.45■□□□□ 0.06
CHMP3-203ENST00000409225 IPO7O95373 1038 aaKnown RBP15.44■□□□□ 0.06
CHMP3-203ENST00000409225 GABRA1P14867 456 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 PAMP19021 973 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 GPR143P51810 404 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 CTBP1Q13363 440 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 SEL1L2Q5TEA6 688 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 RTL4Q6ZR62 310 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 SYCE1Q8N0S2 351 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 VWA5B2Q8N398 1253 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 OR4K1Q8NGD4 311 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 SPATA3Q8NHX4 192 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 PYCR2Q96C36 320 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 SCYL1Q96KG9 808 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 CAPZA3Q96KX2 299 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 AARSD1Q9BTE6 412 aaKnown RBP15.44■□□□□ 0.06
CHMP3-203ENST00000409225 SPNS1Q9H2V7 528 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 KLHL31Q9H511 634 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 CLK4Q9HAZ1 481 aaKnown RBP15.44■□□□□ 0.06
CHMP3-203ENST00000409225 TUBA8Q9NY65 449 aaPredicted RBP15.44■□□□□ 0.06
CHMP3-203ENST00000409225 MYOTQ9UBF9 498 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 ZFP69BQ9UJL9 534 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 PPIEQ9UNP9 301 aaKnown RBP15.44■□□□□ 0.06
CHMP3-203ENST00000409225 MMACHCQ9Y4U1 282 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 RTTNQ86VV8 2226 aa15.44■□□□□ 0.06
CHMP3-203ENST00000409225 TRGV5A0A0B4J1U4 118 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 CTAGE15A4D2H0 777 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 C4orf51C9J302 202 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 TGFBR3LH3BV60 316 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 DVL2O14641 736 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 CD53P19397 219 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 ENDOUP21128 410 aaKnown RBP15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SCTRP47872 440 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 TERF1P54274 439 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 FOXO1Q12778 655 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 CATSPEREQ5SY80 951 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SHEQ5VZ18 495 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SEM1Q6ZVN7 128 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 STRA8Q7Z7C7 330 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 CTAGE6Q86UF2 777 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SLC13A5Q86YT5 568 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SCUBE1Q8IWY4 988 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 NAXEQ8NCW5 288 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 LINC01560Q8TB33 94 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 EEF1AKMT1Q8WVE0 214 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SNF8Q96H20 258 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 PARVBQ9HBI1 364 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SEMA4BQ9NPR2 832 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-203ENST00000409225 SACM1LQ9NTJ5 587 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 BEX4Q9NWD9 120 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-203ENST00000409225 MTRF1LQ9UGC7 380 aaKnown RBP15.43■□□□□ 0.06
CHMP3-203ENST00000409225 EML6Q6ZMW3 1958 aa15.43■□□□□ 0.06
CHMP3-203ENST00000409225 MPDZO75970 2070 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 ARHGAP21Q5T5U3 1957 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 URADA6NGE7 173 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 TUBAL3A6NHL2 446 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 HCN1O60741 890 aa15.42■□□□□ 0.06
CHMP3-203ENST00000409225 P04436 131 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms