RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 COX7A2P14406 83 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 SDC1P18827 310 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 GPR1P46091 355 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 RAD23AP54725 363 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ARSFP54793 590 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 CLDN2P57739 230 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 RACK1P63244 317 aaKnown RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 RPA4Q13156 261 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 DOC2AQ14183 400 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 E2F2Q14209 437 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 NADK2Q4G0N4 442 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 CCNYL2Q5T2Q4 361 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 UNC5DQ6UXZ4 953 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 GCNT7Q6ZNI0 430 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 RBM44Q6ZP01 1051 aaKnown RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 VRK3Q8IV63 474 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 KRTCAP2Q8N6L1 136 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 TP53I13Q8NBR0 393 aaPredicted RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 WDR20Q8TBZ3 569 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ADAMTS16Q8TE57 1224 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 PYURFQ96I23 114 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 APOLD1Q96LR9 279 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 SLC6A18Q96N87 628 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 GRIP2Q9C0E4 1043 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 ATG10Q9H0Y0 220 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 RAD21L1Q9H4I0 556 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 PIF1Q9H611 641 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 SIRT5Q9NXA8 310 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 USE1Q9NZ43 259 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 BTNL2Q9UIR0 455 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 BLOC1S6Q9UL45 172 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 PCDHB14Q9Y5E9 798 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 LRRK1Q38SD2 2015 aa12.36□□□□□ -0.43
SMARCB1-203ENST00000407082 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PDLIM1O00151 329 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PCCBP05166 539 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 THRBP10828 461 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 CD38P28907 300 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 ALDH3B2P48448 385 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TPD52P55327 224 aaPredicted RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TMPRSS3P57727 454 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 LSAMPQ13449 338 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 IL18R1Q13478 541 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 SELPLGQ14242 412 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 IRF4Q15306 451 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 RBM48Q5RL73 367 aaKnown RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 FAM219BQ5XKK7 198 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PNCKQ6P2M8 343 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 GPR141Q7Z602 305 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TMEM145Q8NBT3 493 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PLA2G15Q8NCC3 412 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 DENND6BQ8NEG7 585 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 OR9A1PQ8NGU1 263 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TMBIM1Q969X1 311 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 DTNBP1Q96EV8 351 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 WDR34Q96EX3 536 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 NRBF2Q96F24 287 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 MED8Q96G25 268 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 APIPQ96GX9 242 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TSSK3Q96PN8 268 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PANX1Q96RD7 426 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 ELF4Q99607 663 aaPredicted RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 SH3GL3Q99963 347 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 DDX18Q9NVP1 670 aaKnown RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 AHSPQ9NZD4 102 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 C3orf18Q9UK00 162 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 PCDHGB4Q9UN71 923 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 DLGAP4Q9Y2H0 992 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 WBP11Q9Y2W2 641 aaKnown RBP12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 TSC22D4Q9Y3Q8 395 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 MGAQ8IWI9 3026 aa12.35□□□□□ -0.43
SMARCB1-203ENST00000407082 CROCCQ5TZA2 2017 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 POM121BA6NF01 834 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 MAGEB17A8MXT2 336 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 CLIC1O00299 241 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 VILLO15195 856 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 MTX2O75431 263 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 C1orf105O95561 183 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 C1GALT1C1LP0DN25 315 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 CXCR2P25025 360 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 SERPINB1P30740 379 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 IGFALSP35858 605 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 NEK2P51955 445 aa12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 ADARB1P78563 741 aaKnown RBP12.34□□□□□ -0.43
SMARCB1-203ENST00000407082 PLIN5Q00G26 463 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms