RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 USP36Q9P275 1121 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SNX7Q9UNH6 387 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TMPRSS11DO60235 418 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TNFRSF21O75509 655 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SEC24DO94855 1032 aaPredicted RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TFAP2AP05549 437 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 CHRM5P08912 532 aaPredicted RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TRA2BP62995 288 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 RBBP4Q09028 425 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 Q6ZSR6 202 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 VTCN1Q7Z7D3 282 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 PATL1Q86TB9 770 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 HS3ST5Q8IZT8 346 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 ZNF786Q8N393 782 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TPD52L3Q96J77 140 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 NLNQ9BYT8 704 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SOX17Q9H6I2 414 aaPredicted RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TM9SF3Q9HD45 589 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 NDUFA13Q9P0J0 144 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 ZNF624Q9P2J8 865 aaPredicted RBP23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 MAP4K5Q9Y4K4 846 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 SNX8Q9Y5X2 465 aa23.5■■□□□ 1.35
DNMT3A-206ENST00000406659 TRBV23OR9-2A0A075B6M9 112 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 A0A0G2JN53 185 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 CLIC3O95833 236 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 SEMG1P04279 462 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 PABPC4LP0CB38 370 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 AHRP35869 848 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 MANFP55145 182 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 PPP1R8Q12972 351 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 SLC5A12Q1EHB4 618 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 ALG11Q2TAA5 492 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 OR2T5Q6IEZ7 315 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 TMEM179BQ7Z7N9 219 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 SATL1Q86VE3 508 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 RNF130Q86XS8 419 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 OR2T29Q8NH02 315 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 TEFMQ96QE5 360 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 C17orf62Q9BQA9 187 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 TRIM4Q9C037 500 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 SRMSQ9H3Y6 488 aa23.49■■□□□ 1.35
DNMT3A-206ENST00000406659 A0A1B0GTW7 788 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 SUV39H1O43463 412 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 STATHP02808 62 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 AQP1P29972 269 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 KIAA1614Q5VZ46 1190 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 FAM180BQ6P0A1 224 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 CHRDL2Q6WN34 429 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 USP51Q70EK9 711 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 OFCC1Q8IZS5 231 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 TBC1D20Q96BZ9 403 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 PHF7Q9BWX1 381 aaPredicted RBP23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 ABCG4Q9H172 646 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 KLHL31Q9H511 634 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 TMEM38AQ9H6F2 299 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 TRNAU1APQ9NX07 287 aaKnown RBP23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 IFT80Q9P2H3 777 aaPredicted RBP23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 PNMA8BQ9ULN7 279 aaPredicted RBP23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 ABCG2Q9UNQ0 655 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 U3KQV3 271 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 MYO10Q9HD67 2058 aa23.48■■□□□ 1.35
DNMT3A-206ENST00000406659 A0A0A6YYD5 115 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 SMIM31A0A1B0GVY4 71 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 hCG_2039718K7EN88 272 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 TOR1BO14657 336 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 NOBOXO60393 691 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 PPP2R2BQ00005 443 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 EPS8Q12929 822 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 SCARB2Q14108 478 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 TMEM26Q6ZUK4 368 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 EXOSC8Q96B26 276 aaKnown RBP23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 AICDAQ9GZX7 198 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 TOR3AQ9H497 397 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 C6orf106Q9H6K1 298 aaPredicted RBP23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 CXorf36Q9H7Y0 433 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 C1GALT1Q9NS00 363 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 PLXND1Q9Y4D7 1925 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 PRAMEF26H0Y7S4 382 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 SLC19A1P41440 591 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 RABIFP47224 123 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 ARHGDIAP52565 204 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 NR1H2P55055 460 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 KCTD21Q4G0X4 260 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 TOR1AIP1Q5JTV8 583 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 SHQ1Q6PI26 577 aaKnown RBP23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 Q6ZS52 159 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 AMER3Q8N944 861 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 MFSD9Q8NBP5 474 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 NFKBIDQ8NI38 313 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 ZNF764Q96H86 408 aaPredicted RBP23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 SARGQ9BW04 601 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 GRIP2Q9C0E4 1043 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 TEX10Q9NXF1 929 aaPredicted RBP23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 KLHL20Q9Y2M5 609 aa23.47■■□□□ 1.35
DNMT3A-206ENST00000406659 MYO1GB0I1T2 1018 aa23.46■■□□□ 1.35
DNMT3A-206ENST00000406659 PPM1DO15297 605 aa23.46■■□□□ 1.35
DNMT3A-206ENST00000406659 ERI3O43414 337 aaKnown RBP23.46■■□□□ 1.35
DNMT3A-206ENST00000406659 HS6ST1O60243 411 aa23.46■■□□□ 1.35
DNMT3A-206ENST00000406659 F3P13726 295 aa23.46■■□□□ 1.35
DNMT3A-206ENST00000406659 DRD2P14416 443 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms