RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 CPSF6Q16630 551 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 QSOX2Q6ZRP7 698 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 RPS27LQ71UM5 84 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 CLNKQ7Z7G1 428 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 HUS1BQ8NHY5 278 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 NSUN5Q96P11 429 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 SERINC2Q96SA4 455 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 CSF3RQ99062 836 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 MTERF1Q99551 399 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 SORBS1Q9BX66 1292 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 NOL11Q9H8H0 719 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 KCNK13Q9HB14 408 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 PRDM9Q9NQV7 894 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 PRDM7Q9NQW5 492 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 ASF1BQ9NVP2 202 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 RNF11Q9Y3C5 154 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 PCDHGA10Q9Y5H3 936 aa17.05■□□□□ 0.32
PTPRN2-204ENST00000404321 IGKV3D-11A0A0A0MRZ8 115 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 MYOCOSA0A1B0GUC4 107 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 DYTNA2CJ06 578 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 SMIM24O75264 130 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 WDPCPO95876 746 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 LIM2P55344 173 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 RAB38P57729 211 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 PCDH1Q08174 1060 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 TGM3Q08188 693 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 SLC13A2Q13183 592 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 ZNF169Q14929 603 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 TLR1Q15399 786 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 ZNF793Q6ZN11 406 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 OR1N1Q8NGS0 311 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 UBLCP1Q8WVY7 318 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 ATP6V1E2Q96A05 226 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 MTBPQ96DY7 904 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 KCNC2Q96PR1 638 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 MRPL57Q9BQC6 102 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 NPLQ9BXD5 320 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 MRPL46Q9H2W6 279 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 NTNG1Q9Y2I2 539 aa17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 UBR5O95071 2799 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-204ENST00000404321 SMIM23A6NLE4 172 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 FOXO6A8MYZ6 492 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 OR7A17O14581 309 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 MAN1A2O60476 641 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 SHBGP04278 402 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 SBK3P0C264 359 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 ATP5A1P25705 553 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 PPP2R1BP30154 601 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 NEK2P51955 445 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 SLC26A5P58743 744 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 AP2B1P63010 937 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 EXT1Q16394 746 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 ABHD17BQ5VST6 288 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 KHDRBS2Q5VWX1 349 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 KIF2BQ8N4N8 673 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 ARMC2Q8NEN0 867 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 OR52B6Q8NGF0 335 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 CMTM7Q96FZ5 175 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 DMRT3Q9NQL9 472 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 PRTFDC1Q9NRG1 225 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 STMN3Q9NZ72 180 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 TMEM216Q9P0N5 145 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 PCTPQ9UKL6 214 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 DAPP1Q9UN19 280 aa17.03■□□□□ 0.32
PTPRN2-204ENST00000404321 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TCRBV16S1A1N1A0A5B0 115 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TCP11X1B4DZS4 312 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TGFBR3LH3BV60 316 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TSPAN8P19075 237 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 SERPINB1P30740 379 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 SSR2P43308 183 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 RAP1GDS1P52306 607 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 RPS13P62277 151 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 RELNP78509 3460 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TMEM35AQ53FP2 167 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 LIPJQ5W064 366 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 FAM219BQ5XKK7 198 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 CHSY3Q70JA7 882 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TMEM151AQ8N4L1 468 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 ACOT4Q8N9L9 421 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 GALNT11Q8NCW6 608 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 M1APQ8TC57 530 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 MTFMTQ96DP5 389 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 MAPKAP1Q9BPZ7 522 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 CCDC77Q9BR77 488 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 TBCDQ9BTW9 1192 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.326e-7■■■■■ 52.6
PTPRN2-204ENST00000404321 ANKZF1Q9H8Y5 726 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 MMP25Q9NPA2 562 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 SEMA4BQ9NPR2 832 aaPredicted RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 PNO1Q9NRX1 252 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 PCDHGA11Q9Y5H2 935 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 COPG1Q9Y678 874 aaKnown RBP17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 DOCK10Q96BY6 2186 aa17.02■□□□□ 0.32
PTPRN2-204ENST00000404321 A8MT66 165 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms