RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 IMPG1Q17R60 797 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 VWA2Q5GFL6 755 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 RIPOR1Q6ZS17 1223 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 OVCH1Q7RTY7 1134 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 CACNA2D3Q8IZS8 1091 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 ESX1Q8N693 406 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 OR51Q1Q8NH59 317 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 NAF1Q96HR8 494 aaKnown RBP15.08■□□□□ 0
HMGA1-204ENST00000401473 ZNF317Q96PQ6 595 aaPredicted RBP15.08■□□□□ 0
HMGA1-204ENST00000401473 DPH2Q9BQC3 489 aaPredicted RBP15.08■□□□□ 0
HMGA1-204ENST00000401473 NMRK1Q9NWW6 199 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 HCN3Q9P1Z3 774 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 IFT80Q9P2H3 777 aaPredicted RBP15.08■□□□□ 0
HMGA1-204ENST00000401473 CTSFQ9UBX1 484 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 MAP4K5Q9Y4K4 846 aa15.08■□□□□ 0
HMGA1-204ENST00000401473 USP24Q9UPU5 2620 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 OR2W5A6NFC9 320 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 TERTO14746 1132 aaKnown RBP15.07■□□□□ 0
HMGA1-204ENST00000401473 CHST10O43529 356 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 RGS14O43566 566 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 PEX11AO75192 247 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 JRKO75564 520 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 RSL1D1O76021 490 aaKnown RBP15.07■□□□□ 0
HMGA1-204ENST00000401473 TCN2P20062 427 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 AGXTP21549 392 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 PRPH2P23942 346 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 STAT5AP42229 794 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 TSFMP43897 325 aaKnown RBP15.07■□□□□ 0
HMGA1-204ENST00000401473 HK2P52789 917 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 TGM3Q08188 693 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 SLAMF1Q13291 335 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 ERV3-1Q14264 604 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 ARHGAP40Q5TG30 622 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 MLIPQ5VWP3 458 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 MRPL14Q6P1L8 145 aaKnown RBP15.07■□□□□ 0
HMGA1-204ENST00000401473 FAM198BQ6UWH4 519 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 LAPTM4BQ86VI4 370 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 SERINC2Q96SA4 455 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 CCT7Q99832 543 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 WDR55Q9H6Y2 383 aaPredicted RBP15.07■□□□□ 0
HMGA1-204ENST00000401473 MEAF6Q9HAF1 191 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 TRPC4Q9UBN4 977 aa15.07■□□□□ 0
HMGA1-204ENST00000401473 A0A0A6YYD5 115 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 FAM227AF5H4B4 570 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SEC22BO75396 215 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 LIPCP11150 499 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 LIM2P55344 173 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 NR6A1Q15406 480 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 GALNTL6Q49A17 601 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 C6orf136Q5SQH8 315 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 MRM1Q6IN84 353 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 GALNT18Q6P9A2 607 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 HOMEZQ8IX15 550 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 KIRREL3Q8IZU9 778 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 CA13Q8N1Q1 262 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 ZCCHC7Q8N3Z6 543 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 SNIP1Q8TAD8 396 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 CT55Q8WUE5 264 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 THOC1Q96FV9 657 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 PEX11GQ96HA9 241 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 MAPKAP1Q9BPZ7 522 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 AKTIPQ9H8T0 292 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 FGFR1OP2Q9NVK5 253 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 C1orf109Q9NX04 203 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 AHSPQ9NZD4 102 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 CROTQ9UKG9 612 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 DAPP1Q9UN19 280 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 RAXQ9Y2V3 346 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 ASB4Q9Y574 426 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 IGLV3-12A0A075B6K2 115 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SLCO1B7G3V0H7 640 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SDHDO14521 159 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 B3GALT2O43825 422 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 KLF7O75840 302 aaPredicted RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 FBLP22087 321 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 EPHA3P29320 983 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 EFNA3P52797 238 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 PCBP4P57723 403 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 ACSM2AQ08AH3 577 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SRSF6Q13247 344 aaKnown RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 CLN3Q13286 438 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 NKG7Q16617 165 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SLC9B1Q4ZJI4 515 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 ACSM2BQ68CK6 577 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 LARP4Q71RC2 724 aaKnown RBP eCLIP15.06■□□□□ 06e-11■□□□□ 11.3
HMGA1-204ENST00000401473 LRRC34Q8IZ02 419 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 IL22RA1Q8N6P7 574 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 UCN3Q969E3 161 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 TUBGCP3Q96CW5 907 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 YIPF2Q9BWQ6 316 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 COPS7BQ9H9Q2 264 aaPredicted RBP15.06■□□□□ 0
HMGA1-204ENST00000401473 LRTM1Q9HBL6 345 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 SIRT5Q9NXA8 310 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 VTI1BQ9UEU0 232 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 ATG4BQ9Y4P1 393 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 USH1CQ9Y6N9 552 aa15.06■□□□□ 0
HMGA1-204ENST00000401473 PKD1L2Q7Z442 2459 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 NBEAQ8NFP9 2946 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 A0A088AWK7 358 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 VSTM2BA6NLU5 285 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms