RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 SEMA3GQ9NS98 782 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 SEC14L3Q9UDX4 400 aa12.13□□□□□ -0.47
PPP4R1-202ENST00000400555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 HIDE1A8MVS5 230 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZW10O43264 779 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 CH25HO95992 272 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DBPQ10586 325 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 KEAP1Q14145 624 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 Q6ZNB5 142 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SHFQ7M4L6 423 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 OR5AR1Q8NGP9 310 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TRMT2BQ96GJ1 504 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ART5Q96L15 291 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 MGLLQ99685 303 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC6A16Q9GZN6 736 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IL36AQ9UHA7 158 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SNX11Q9Y5W9 270 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 CACNA1CQ13936 2221 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PIPSLA2A3N6 862 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 CLCA1A8K7I4 914 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PDZK1P1A8MUH7 402 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 GFYI3L273 518 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 VIPR2P41587 438 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TEAD4Q15561 434 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 STEAP3Q658P3 488 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DTX3Q8N9I9 347 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DYNC2LI1Q8TCX1 351 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 C16orf78Q8WTQ4 265 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TRMT61BQ9BVS5 477 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 BEX2Q9BXY8 128 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PRRG3Q9BZD7 231 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TMEM45AQ9NWC5 275 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SLC13A4Q9UKG4 626 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 OR1F1O43749 312 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TLX2O43763 284 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 GASTP01350 101 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IFNA14P01570 189 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IGHA2P01877 340 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PCCBP05166 539 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ADH1AP07327 375 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF8P17098 575 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 MRPL19P49406 292 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 COPZ1P61923 177 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PIN1Q13526 163 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 OXA1LQ15070 435 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ARHGAP15Q53QZ3 475 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TCEAL5Q5H9L2 206 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SYT6Q5T7P8 510 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 AKAP14Q86UN6 197 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IPCEF1Q8WWN9 437 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IMP3Q9NV31 184 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 GPC6Q9Y625 555 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 SCN2BO60939 215 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PRKRAO75569 313 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 AP2A2O94973 939 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 MPC1LP0DKB6 136 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ANXA8P13928 327 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PTPN5P54829 565 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DSTNP60981 165 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 IQCCQ4KMZ1 466 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TMEM215Q68D42 235 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 DESI1Q6ICB0 168 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 BRAT1Q6PJG6 821 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 OR5D16Q8NGK9 328 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 UBASH3BQ8TF42 649 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZNF296Q8WUU4 475 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 AKIP1Q9NQ31 210 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TM7SF3Q9NS93 570 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 KLHL20Q9Y2M5 609 aa12.12□□□□□ -0.47
PPP4R1-202ENST00000400555 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CDH23Q9H251 3354 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 OR2A25A4D2G3 310 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 TBC1D3BA6NDS4 549 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 PPM1DO15297 605 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 AQP9O43315 295 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 FRS3O43559 492 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 GREM1O60565 184 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CCNKO75909 580 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 CSF2P04141 144 aa12.11□□□□□ -0.47
PPP4R1-202ENST00000400555 PPP5CP53041 499 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms