RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 JAG1P78504 1218 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 DNM1P34Q6PK57 102 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 PRR22Q8IZ63 422 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 SHKBP1Q8TBC3 707 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 SARDHQ9UL12 918 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 GABRDO14764 452 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 BEST1O76090 585 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 TPPPO94811 219 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 HTR7P34969 479 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 TREML1Q86YW5 311 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 SMOQ99835 787 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 PTGES2Q9H7Z7 377 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 OXSMQ9NWU1 459 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 WDR45Q9Y484 360 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 FAM171A2A8MVW0 826 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 RTCAO00442 366 aaKnown RBP13.27□□□□□ -0.29
VAPA-202ENST00000400000 HNRNPKP61978 463 aaKnown RBP eCLIP13.27□□□□□ -0.29
VAPA-202ENST00000400000 GAS6Q14393 721 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 ZNF792Q3KQV3 632 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 ACSBG2Q5FVE4 666 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 SH3D19Q5HYK7 790 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 ASB3Q9Y575 518 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 ABLIM1O14639 778 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PTGER1P34995 402 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 LEPRP48357 1165 aaKnown RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 SLITRK4Q8IW52 837 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PKP2Q99959 881 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 MS4A12Q9NXJ0 267 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PPP4R1LQ9P1A2 415 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 ITGB8P26012 769 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 MAGEA3P43357 314 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 GJA8P48165 433 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 CASP6P55212 293 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 SELENOVP59797 346 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PON3Q15166 354 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PHTF2Q8N3S3 785 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 C10orf82Q8WW14 230 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FUZQ9BT04 418 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 KCMF1Q9P0J7 381 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 ZFR2Q9UPR6 939 aaKnown RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 BACE2Q9Y5Z0 518 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PPLO60437 1756 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 DLX3O60479 287 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 MAOBP27338 520 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 ACVR1BP36896 505 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 COMTD1Q86VU5 262 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 MEX3DQ86XN8 651 aaKnown RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 NAT8LQ8N9F0 302 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 OR8K5Q8NH50 307 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FBXL8Q96CD0 374 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 CGREF1Q99674 301 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PEX16Q9Y5Y5 336 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 CD8B2A6NJW9 211 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FAM72CH0Y354 149 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PDYNP01213 254 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 CD8BP10966 210 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FAM72AQ5TYM5 149 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FAM72DQ6L9T8 149 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 DCDC5Q6ZRR9 648 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FAM72BQ86X60 149 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 NPRL2Q8WTW4 380 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PYURFQ96I23 114 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 FAM118AQ9NWS6 357 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 MED11Q9P086 117 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 AASSQ9UDR5 926 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PCDHGA10Q9Y5H3 936 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 ZNF35P13682 527 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 ENDOUP21128 410 aaKnown RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 RBMS1P29558 406 aaKnown RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 PBX1P40424 430 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PRMT2P55345 433 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 OR4D2P58180 307 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 PLP2Q04941 152 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 ELOCQ15369 112 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 SAMD14Q8IZD0 417 aaPredicted RBP13.26□□□□□ -0.29
VAPA-202ENST00000400000 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
VAPA-202ENST00000400000 A0A0A6YYH2 397 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 A6NJ64 397 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ZNF280AP59817 542 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 PLGLAQ15195 96 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GATAD2BQ8WXI9 593 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 ZC3H10Q96K80 434 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 ADH1BP00325 375 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ASGR2P07307 311 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 PRSS56P0CW18 603 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 HSD17B2P37059 387 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 SLC18A1P54219 525 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CBLBQ13191 982 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 SQSTM1Q13501 440 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 SHFQ7M4L6 423 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms