RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 A8MUA0 341 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 SAP18O00422 153 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PLK4O00444 970 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 B4GALT3O60512 393 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PLOD3O60568 738 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 SRCP12931 536 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 RPL9P32969 192 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 THPOP40225 353 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CRYBA2P53672 197 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 FAPQ12884 760 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CHIT1Q13231 466 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CCL14Q16627 93 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MEX3DQ86XN8 651 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 NLGN4YQ8NFZ3 816 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 DACT3Q96B18 629 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MED30Q96HR3 178 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 AP5M1Q9H0R1 490 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 SLA2Q9H6Q3 261 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIM45Q9H8W5 580 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 RNF121Q9H920 327 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CLN6Q9NWW5 311 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PCDHGA2Q9Y5H1 932 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 POLR2AP24928 1970 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A1B0GVC2 190 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM240BA0A1B0GVZ2 78 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 A6NIN4 97 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SH3BP5O60239 455 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF780AO75290 641 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CSF3P09919 207 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 MSX1P28360 303 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 RHOAP61586 193 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CSNK2BP67870 215 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CACNG1Q06432 222 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 HYAL2Q12891 473 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CHRNA6Q15825 494 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 TYW3Q6IPR3 259 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 UBE2R2Q712K3 238 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 HMGN2P46Q86SG4 172 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SERPINA11Q86U17 422 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM20CQ8IXL6 584 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 C19orf18Q8NEA5 215 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 OR52E4Q8NGH9 312 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 NFKBIDQ8NI38 313 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 TSPAN18Q96SJ8 248 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 NARFLQ9H6Q4 476 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 HHATLQ9HCP6 504 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 MCUBQ9NWR8 336 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 TMEM161AQ9NX61 479 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 PADI3Q9ULW8 664 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SATB2Q9UPW6 733 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 AP3M1Q9Y2T2 418 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CMAHPQ9Y471 501 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 OARD1Q9Y530 152 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 PCDHGB2Q9Y5G2 931 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 LOC102723532A0A0G2JNH3 316 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 UGT2B17O75795 530 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CYP2A6P11509 494 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 DDX5P17844 614 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 TNNI3P19429 210 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SOAT1P35610 550 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 MRPS6P82932 125 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ACSM2AQ08AH3 577 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF177Q13360 481 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 GAB1Q13480 694 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 PCBP1Q15365 356 aaKnown RBP eCLIP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SPHARQ15513 63 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ACSM2BQ68CK6 577 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CD300LGQ6UXG3 332 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 WDR53Q7Z5U6 358 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 KRT73Q86Y46 540 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 IQCF1Q8N6M8 205 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 MED8Q96G25 268 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CRELD1Q96HD1 420 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 RNF170Q96K19 258 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 OPALINQ96PE5 141 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 PKMYT1Q99640 499 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 DOHHQ9BU89 302 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 DUSP26Q9BV47 211 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SRRQ9GZT4 340 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 MKRN2Q9H000 416 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM83DQ9H4H8 585 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 FBXO44Q9H4M3 255 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 CTPS2Q9NRF8 586 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 IL17CQ9P0M4 197 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 RNF181Q9P0P0 153 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 HECAQ9UBI9 543 aaPredicted RBP9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF236Q9UL36 1845 aa9.47□□□□□ -0.89
PTCHD4-202ENST00000398738 ADAMDEC1O15204 470 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 PRPS2P11908 318 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 RPS3P23396 243 aaKnown RBP eCLIP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 SDC2P34741 201 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 IRF8Q02556 426 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIQKQ629K1 86 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF57Q68EA5 555 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms