RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 GBP7Q8N8V2 638 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 SLC45A3Q96JT2 553 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 ROGDIQ9GZN7 287 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 TUBB1Q9H4B7 451 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 MANSC1Q9H8J5 431 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 PADI2Q9Y2J8 665 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 PTGDR2Q9Y5Y4 395 aa16.41■□□□□ 0.22
CSNK1D-204ENST00000398519 MAP1BP46821 2468 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 CHST10O43529 356 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 B3GALT2O43825 422 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 SNNO75324 88 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 SNUPNO95149 360 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 ZGLP1P0C6A0 271 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 BSGP35613 385 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 XCR1P46094 333 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 OCA2Q04671 838 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 TBL3Q12788 808 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 RUNX2Q13950 521 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 AP5B1Q2VPB7 878 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 SHISA6Q6ZSJ9 500 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 TRIM46Q7Z4K8 759 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 TRIM42Q8IWZ5 723 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 OR2Y1Q8NGV0 311 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 STARD8Q92502 1023 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 PEX11GQ96HA9 241 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 NPLQ9BXD5 320 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 TGIF2Q9GZN2 237 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 SOX17Q9H6I2 414 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 CLK4Q9HAZ1 481 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 INTS9Q9NV88 658 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 VPS29Q9UBQ0 182 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 NXT1Q9UKK6 140 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 PTRH2Q9Y3E5 179 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 RAP2CQ9Y3L5 183 aa16.4■□□□□ 0.22
CSNK1D-204ENST00000398519 SRRM3A6NNA2 597 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 KLF11O14901 512 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 EEDO75530 441 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 JRKO75564 520 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 CREG1O75629 220 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 BMP10O95393 424 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 UMODP07911 640 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 CD63P08962 238 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 KLC1Q07866 573 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 IL10RAQ13651 578 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 BROXQ5VW32 411 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 ATG16L1Q676U5 607 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 RNF165Q6ZSG1 346 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 PRSS58Q8IYP2 241 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 METTL4Q8N3J2 472 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 TWIST2Q8WVJ9 160 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 ZNF75CPQ92670 426 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 RBCK1Q9BYM8 510 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 DDX31Q9H8H2 851 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 NMRK1Q9NWW6 199 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 HAO1Q9UJM8 370 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 LOC400499M0QZD8 3231 aa16.39■□□□□ 0.21
CSNK1D-204ENST00000398519 A0A0A6YYD5 115 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 CHEK2O96017 543 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 FOLR3P41439 243 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 EFNA3P52797 238 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 LIM2P55344 173 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 ERV3-1Q14264 604 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 COMMD6Q7Z4G1 85 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 LAPTM4BQ86VI4 370 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 NUDT13Q86X67 352 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 ZCCHC7Q8N3Z6 543 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 ILKAPQ9H0C8 392 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 THAP1Q9NVV9 213 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 DAPP1Q9UN19 280 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 CCL27Q9Y4X3 112 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 PIP5K1BO14986 540 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 GBAP04062 536 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 LINC00032P0C843 101 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 RNH1P13489 461 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 OCRLQ01968 901 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 SLAMF1Q13291 335 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 NUP210LQ5VU65 1888 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 C1orf52Q8N6N3 182 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 OR2T11Q8NH01 316 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 CHTF18Q8WVB6 975 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 TBC1D20Q96BZ9 403 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 APIPQ96GX9 242 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 OR1F2PQ96R84 312 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 MAPKAP1Q9BPZ7 522 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 LYRM4Q9HD34 91 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 LANCL2Q9NS86 450 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 AHSPQ9NZD4 102 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 KCMF1Q9P0J7 381 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 USP24Q9UPU5 2620 aa16.38■□□□□ 0.21
CSNK1D-204ENST00000398519 DSPP15924 2871 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-204ENST00000398519 CCDC88CQ9P219 2028 aa16.37■□□□□ 0.21
CSNK1D-204ENST00000398519 FAM227AF5H4B4 570 aa16.37■□□□□ 0.21
CSNK1D-204ENST00000398519 NKX2-8O15522 239 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms