RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IL3P08700 152 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 IL1RNP18510 177 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 RABIFP47224 123 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 LRIT3Q3SXY7 679 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 RCBTB2O95199 551 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 PSKH1P11801 424 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 HERC3Q15034 1050 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 MVB12BQ9H7P6 319 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CACNA1FO60840 1977 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 FAM159BA6NKW6 160 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CTSAP10619 480 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CLDN2P57739 230 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 ZMYND11Q15326 602 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 DNAJB8Q8NHS0 232 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 KCNS2Q9ULS6 477 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 J3QRK9 145 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 MECP2P51608 486 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 NCEH1Q6PIU2 408 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 TREML1Q86YW5 311 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 DAZLQ92904 295 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 TIGARQ9NQ88 270 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 PMF1-BGLAPU3KQ54 211 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 EBLN1P0CF75 366 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CYP1B1Q16678 543 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 MORN1Q5T089 497 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 MAP3K3Q99759 626 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 OAZ3Q9UMX2 235 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 PON3Q15166 354 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 PSAPL1Q6NUJ1 521 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 GPALPP1Q8IXQ4 340 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 LCHNA4D1U4 455 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 HTR3EA5X5Y0 456 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 GRPRP30550 384 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 S100A10P60903 97 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
TTC28-201ENST00000397906 ARHGAP22Q7Z5H3 698 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 ZNF565Q8N9K5 539 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 RLN3Q8WXF3 142 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
TTC28-201ENST00000397906 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 FAM163BP0C2L3 166 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 ZNF84P51523 738 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 NKAPLQ5M9Q1 402 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TRIM73Q86UV7 250 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 SPERTQ8NA61 448 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 NSUN5Q96P11 429 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 TSGA13Q96PP4 275 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 POMPQ9Y244 141 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RGPD5Q99666 1765 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 FABP12A6NFH5 140 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 BARD1Q99728 777 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 A6NLC8 198 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 L7N2F9 121 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TLX2O43763 284 aaPredicted RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 HMGN1P05114 100 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 VAMP2P63027 116 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 LYSMD4Q5XG99 296 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 LRRC69Q6ZNQ3 347 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TMBIM1Q969X1 311 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 OR51I1Q9H343 314 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 SSU72Q9NP77 194 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 ZNF69Q9UC07 566 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 NUP188Q5SRE5 1749 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 A0A1B0GVI7 797 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 EDNRBP24530 442 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 SHC2P98077 582 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 ZNF783Q6ZMS7 281 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 GALNT12Q8IXK2 581 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 OR14L1PQ8NHC6 308 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 CCDC115Q96NT0 180 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 G6PC3Q9BUM1 346 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 PRODH2Q9UF12 536 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TEX46H3BTG2 121 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 PIK3CBP42338 1070 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 PITPNAQ00169 270 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 SNX29P2Q8IUI4 249 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 TOE1Q96GM8 510 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 CADM1Q9BY67 442 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 EHD1Q9H4M9 534 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 HEBP1Q9NRV9 189 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 HCN4Q9Y3Q4 1203 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.66
TTC28-201ENST00000397906 F2RL3Q96RI0 385 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RPF2Q9H7B2 306 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 CFL1P23528 166 aaKnown RBP10.92□□□□□ -0.66
TTC28-201ENST00000397906 KCNC3Q14003 757 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RABL3Q5HYI8 236 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 OR4C15Q8NGM1 316 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 KIAA1191Q96A73 305 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 MOCOSQ96EN8 888 aa10.92□□□□□ -0.66
TTC28-201ENST00000397906 RPH3AQ9Y2J0 694 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms