RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 GABRR3A8MPY1 467 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 CIB2O75838 187 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 LDOC1O95751 146 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 HOXB3P14651 431 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 PPIBP23284 216 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 GABRA4P48169 554 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 ACY1Q03154 408 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 ILKQ13418 452 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 GRM7Q14831 915 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 FRMPD2BQ6IN97 320 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 TLDC1Q6P9B6 456 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 DHDDSQ86SQ9 333 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 TRIML2Q8N7C3 387 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 Q8N9G6 341 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 CLHC1Q8NHS4 586 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 CCDC115Q96NT0 180 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 TEFMQ96QE5 360 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 THTPAQ9BU02 230 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 KLHL31Q9H511 634 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 ANKHQ9HCJ1 492 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 NEUROD4Q9HD90 331 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 MAP10Q9P2G4 905 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 ABCD2Q9UBJ2 740 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 PCDHGB4Q9UN71 923 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 CORO2BQ9UQ03 480 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 GMEB1Q9Y692 573 aa18.07■□□□□ 0.48
TSPAN4-204ENST00000397404 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 ADAMTS9Q9P2N4 1935 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 IL3P08700 152 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 ZCCHC18P0CG32 403 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 ZNF888P0CJ79 500 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 VSX2P58304 361 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 SLAMF1Q13291 335 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 MLC1Q15049 377 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 CSRP2Q16527 193 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 MUM1Q2TAK8 710 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 PGS1Q32NB8 556 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 WASHC2DQ5SRD0 308 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 NKAIN2Q5VXU1 208 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 RETREG3Q86VR2 466 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 FBXW8Q8N3Y1 598 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 KIF2BQ8N4N8 673 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 PPM1MQ96MI6 270 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 CDC6Q99741 560 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 MUC13Q9H3R2 512 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 FAM60AQ9NP50 221 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 TMEM9BQ9NQ34 198 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 SH3BP4Q9P0V3 963 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 FTSJ1Q9UET6 329 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 USP34Q70CQ2 3546 aa18.06■□□□□ 0.48
TSPAN4-204ENST00000397404 LOC105369274A0A096LPK9 316 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 LOC102723532A0A0G2JNH3 316 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 RFXANKO14593 260 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 LRATO95237 230 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 EIF2S1P05198 315 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 RPLP0P05388 317 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 CDK4P11802 303 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 CSF2RBP32927 897 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ARSFP54793 590 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 BTN3A2P78410 334 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 PGM2L1Q6PCE3 622 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ZNF793Q6ZN11 406 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ULK2Q8IYT8 1036 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 GPR135Q8IZ08 494 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 OR4N4Q8N0Y3 316 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 KCT2Q8NC54 265 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 GOT1L1Q8NHS2 421 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 CDC26Q8NHZ8 85 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 POP5Q969H6 163 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ZBED6CLQ96FA7 236 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 CNDP2Q96KP4 475 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 FCRL4Q96PJ5 515 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 GBP5Q96PP8 586 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 CGREF1Q99674 301 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 AICDAQ9GZX7 198 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ACSS1Q9NUB1 689 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 GIMAP4Q9NUV9 329 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 TMEM181Q9P2C4 612 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ZNF282Q9UDV7 671 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 SERTAD3Q9UJW9 196 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 L3MBTL1Q9Y468 752 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ASB4Q9Y574 426 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 PCDHGA7Q9Y5G6 932 aa18.05■□□□□ 0.48
TSPAN4-204ENST00000397404 ASPDHA6ND91 283 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 SYNDIG1LA6NDD5 238 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 H0YIG0 161 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 RTCAO00442 366 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 P2RX6O15547 441 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 AKAP10O43572 662 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 TMPRSS11DO60235 418 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 GALR3O60755 368 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 NSA2O95478 260 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 DGKQP52824 942 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 KCNJ2P63252 427 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 PAGE3Q5JUK9 113 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 C6orf10Q5SRN2 563 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 NDUFAF5Q5TEU4 345 aa18.04■□□□□ 0.48
TSPAN4-204ENST00000397404 DLEU7Q6UYE1 221 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms