RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 KLC1Q07866 573 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 SLAMF1Q13291 335 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 AGKQ53H12 422 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 HES3Q5TGS1 186 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 MRM1Q6IN84 353 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 PRMT9Q6P2P2 845 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 C6orf89Q6UWU4 347 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 DHRS13Q6UX07 377 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 CDC26Q8NHZ8 85 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 RP9Q8TA86 221 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 PROKR1Q8TCW9 393 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 TESCQ96BS2 214 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 SLC25A23Q9BV35 468 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 PRDM9Q9NQV7 894 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 TXLNGQ9NUQ3 528 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 BAIAP2L1Q9UHR4 511 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 NAALAD2Q9Y3Q0 740 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 PCDHB3Q9Y5E6 796 aa22.34■■□□□ 1.17
TSPAN4-202ENST00000397396 CAPN14A8MX76 684 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 POLR1CO15160 346 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 TMPRSS11DO60235 418 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 CSO75390 466 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 GBAP04062 536 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 DRD2P14416 443 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 TACR1P25103 407 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 BUD31P41223 144 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 GCGRP47871 477 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 PAOXQ6QHF9 649 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 TMEM126BQ8IUX1 230 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 ZNF764Q96H86 408 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 WDR41Q9HAD4 459 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 ATAD3AQ9NVI7 634 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 CCDC167Q9P0B6 97 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 LOXL2Q9Y4K0 774 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 WDR87Q6ZQQ6 2873 aa22.33■■□□□ 1.17
TSPAN4-202ENST00000397396 CCDC187A0A096LP49 1063 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 A0A1B0GX78 115 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 DSCR3O14972 297 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 IL6P05231 212 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 CTSBP07858 339 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 TLX1P31314 330 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 NOVA1P51513 510 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 MNAT1P51948 309 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 POLR2JP52435 117 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 NME5P56597 212 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 UFM1P61960 85 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 SRSF11Q05519 484 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 CYLC2Q14093 348 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 RCAN2Q14206 197 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 FAM71E1Q6IPT2 247 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 SLCO6A1Q86UG4 719 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 GPR180Q86V85 440 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 NATD1Q8N6N6 113 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 BMPERQ8N8U9 685 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 CLHC1Q8NHS4 586 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 ZPBPQ9BS86 351 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 ACTL8Q9H568 366 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 CLMPQ9H6B4 373 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 REEP4Q9H6H4 257 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 MIEF1Q9NQG6 463 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 OCIAD1Q9NX40 245 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 TAGLN3Q9UI15 199 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 MRPS2Q9Y399 296 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 COL27A1Q8IZC6 1860 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 FAM186AA6NE01 2351 aa22.32■■□□□ 1.16
TSPAN4-202ENST00000397396 SPAARA0A1B0GVQ0 90 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 C1orf226A1L170 272 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 BLACEA4D250 179 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 BBIP1A8MTZ0 92 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 SCAMP2O15127 329 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 ZNF749O43361 778 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 SCRG1O75711 98 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 SNRPB2P08579 225 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 IL3P08700 152 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 DDCP20711 480 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 C2orf80Q0P641 193 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 STX5Q13190 355 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 RHBDD2Q6NTF9 364 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 BLOC1S3Q6QNY0 202 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 CEACAM20Q6UY09 585 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 TTLL10Q6ZVT0 673 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 RAB11FIP2Q7L804 512 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 DGLUCYQ7Z3D6 616 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 TMPRSS12Q86WS5 348 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 RIMKLAQ8IXN7 391 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 EFCAB3Q8N7B9 438 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 TM4SF18Q96CE8 201 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 ACTR5Q9H9F9 607 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 EHD3Q9NZN3 535 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 DAPP1Q9UN19 280 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 ASB4Q9Y574 426 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 PCNX2A6NKB5 2137 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 RIF1Q5UIP0 2472 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 A0A0A6YYC8 382 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 I3L1I5 382 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 CFLARO15519 480 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 FOXS1O43638 330 aa22.31■■□□□ 1.16
TSPAN4-202ENST00000397396 TBX19O60806 448 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms