RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TNFRSF17Q02223 184 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 SRSF6Q13247 344 aaKnown RBP9.99□□□□□ -0.81
NUP98-205ENST00000397007 SLC9A5Q14940 896 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 RBBP7Q16576 425 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 C6orf136Q5SQH8 315 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 PPP1R32Q7Z5V6 425 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 OR2Y1Q8NGV0 311 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 ADAMTS18Q8TE60 1221 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 RERGQ96A58 199 aaPredicted RBP9.99□□□□□ -0.81
NUP98-205ENST00000397007 RGMAQ96B86 450 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 C19orf60Q96EN9 201 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 SEMA4CQ9C0C4 833 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 OR51B5Q9H339 312 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 THSD1Q9NS62 852 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 CTSFQ9UBX1 484 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 VTI1BQ9UEU0 232 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 GPR45Q9Y5Y3 372 aa9.99□□□□□ -0.81
NUP98-205ENST00000397007 SLC28A1O00337 649 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 FURINP09958 794 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 CERS1P27544 350 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 TIA1P31483 386 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■■■□ 21.9
NUP98-205ENST00000397007 TLE3Q04726 772 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 FHL5Q5TD97 284 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 THEMIS2Q5TEJ8 643 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SUN3Q8TAQ9 357 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 FAR2Q96K12 515 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 MAPKAP1Q9BPZ7 522 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 IQCGQ9H095 443 aaKnown RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 PRORYQ9H606 182 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ZNF304Q9HCX3 659 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 C14orf105Q9NVL8 296 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 DOCK10Q96BY6 2186 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ULK1O75385 1050 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 TGFB1P01137 390 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SDC1P18827 310 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 S1PR1P21453 382 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 PTPN4P29074 926 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SERPINB3P29508 390 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 MAP3K8P41279 467 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 EMX2Q04743 252 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 RGS1Q08116 209 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 MLC1Q15049 377 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 TUBB8Q3ZCM7 444 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ATG16L1Q676U5 607 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 IKBIPQ70UQ0 350 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ANKRD42Q8N9B4 389 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 METTL6Q8TCB7 284 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 FGF11Q92914 225 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 IMMP1LQ96LU5 166 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SHCBP1LQ9BZQ2 653 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ROGDIQ9GZN7 287 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ILKAPQ9H0C8 392 aaPredicted RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 ZNF700Q9H0M5 742 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 CHST8Q9H2A9 424 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 INTS9Q9NV88 658 aaKnown RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 ATP6V1HQ9UI12 483 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 ATG4BQ9Y4P1 393 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 A0A0A6YYC8 382 aaPredicted RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 I3L1I5 382 aaPredicted RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 HDAC3O15379 428 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 KRT6AP02538 564 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 KRT6BP04259 564 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 JMJD7P0C870 316 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 KRT6CP48668 564 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 DUSP2Q05923 314 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 IFT88Q13099 833 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 TERF2Q15554 542 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 HIST2H2ACQ16777 129 aaPredicted RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 SYT16Q17RD7 645 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SLC9B1Q4ZJI4 515 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 HIST2H2AA3Q6FI13 130 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 TMEM126BQ8IUX1 230 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 CPSF7Q8N684 471 aaKnown RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 COQ8BQ96D53 544 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 MRPL1Q9BYD6 325 aaKnown RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 KCNK9Q9NPC2 374 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 LYARQ9NX58 379 aaKnown RBP9.98□□□□□ -0.81
NUP98-205ENST00000397007 NKIRAS1Q9NYS0 192 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 EHD3Q9NZN3 535 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 CROTQ9UKG9 612 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 USP24Q9UPU5 2620 aa9.98□□□□□ -0.81
NUP98-205ENST00000397007 SLCO1B7G3V0H7 640 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 SGK494L7N484 410 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 FFAR3O14843 346 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 GPR42O15529 346 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 NTRK1P04629 796 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 HPDP32754 393 aaPredicted RBP9.97□□□□□ -0.81
NUP98-205ENST00000397007 IDH3AP50213 366 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 WNT3P56703 355 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 PCSK4Q6UW60 755 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 PIGWQ7Z7B1 504 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 CCNYL1Q8N7R7 359 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 C10orf82Q8WW14 230 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 MESP1Q9BRJ9 268 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 AKTIPQ9H8T0 292 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 ZNF223Q9UK11 482 aaPredicted RBP9.97□□□□□ -0.81
NUP98-205ENST00000397007 TCFL5Q9UL49 500 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 PCDHA9Q9Y5H5 950 aa9.97□□□□□ -0.81
NUP98-205ENST00000397007 ANKDD1BA6NHY2 528 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms