RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 SH2D4BQ5SQS7 431 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 CYP20A1Q6UW02 462 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 SHISA6Q6ZSJ9 500 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 NUDT13Q86X67 352 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 ZC3H7AQ8IWR0 971 aaKnown RBP12.92□□□□□ -0.34
GAPDH-204ENST00000396859 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 ACOT4Q8N9L9 421 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 OR5T3Q8NGG3 340 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 DYDC1Q8WWB3 177 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 METTL21AQ8WXB1 218 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 THAP4Q8WY91 577 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 TBC1D20Q96BZ9 403 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 SPSB2Q99619 263 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 AICDAQ9GZX7 198 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 PFDN4Q9NQP4 134 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 PRDM7Q9NQW5 492 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 ZNF446Q9NWS9 450 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 C3orf18Q9UK00 162 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 MKL2Q9ULH7 1088 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 POLHQ9Y253 713 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 FRYQ5TBA9 3013 aa12.92□□□□□ -0.34
GAPDH-204ENST00000396859 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 RTCAO00442 366 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CLDN4O14493 209 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 PLPP1O14494 284 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 NKX2-8O15522 239 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CNOT3O75175 753 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CHRNGP07510 517 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 FHP07954 510 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CYC1P08574 325 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 WT1P19544 449 aaPredicted RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 ATP5A1P25705 553 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 SLC1A6P48664 564 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 RAB38P57729 211 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 ABCE1P61221 599 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 PPP2R2AP63151 447 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 ABRAXAS2Q15018 415 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 TUBB8Q3ZCM7 444 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CLEC6AQ6EIG7 209 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 C19orf48Q6RUI8 117 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 GPR155Q7Z3F1 870 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 UBE3DQ7Z6J8 389 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 CA13Q8N1Q1 262 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 ZCCHC7Q8N3Z6 543 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 RAB3IL1Q8TBN0 382 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 NACC2Q96BF6 587 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 HBEGFQ99075 208 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 RBCK1Q9BYM8 510 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 LYRM4Q9HD34 91 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 LYARQ9NX58 379 aaKnown RBP12.91□□□□□ -0.34
GAPDH-204ENST00000396859 MS4A12Q9NXJ0 267 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 PHF11Q9UIL8 331 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 FER1L5A0AVI2 2057 aa12.91□□□□□ -0.34
GAPDH-204ENST00000396859 ACACBO00763 2458 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SERTM1A2A2V5 107 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 IDSB3KWA1 339 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SLC28A1O00337 649 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 RGS14O43566 566 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 B4GALT2O60909 372 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 GUCY1B2O75343 617 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SCELO95171 688 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 ETHE1O95571 254 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 UMODP07911 640 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 FGF4P08620 206 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 MMP11P24347 488 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SERPINB3P29508 390 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 TLX1P31314 330 aaPredicted RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 HTR6P50406 440 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 FOXA1P55317 472 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 ACSM2AQ08AH3 577 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SLAMF1Q13291 335 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 IL10RAQ13651 578 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 RUNX2Q13950 521 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 FAM69BQ5VUD6 431 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 ACSM2BQ68CK6 577 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 SCIMPQ6UWF3 145 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 MRPL1Q9BYD6 325 aaKnown RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 ILKAPQ9H0C8 392 aaPredicted RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 DDX31Q9H8H2 851 aaKnown RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 C19orf25Q9UFG5 118 aaPredicted RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 ADAM29Q9UKF5 820 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 FBXW2Q9UKT8 454 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 MAN2B2Q9Y2E5 1009 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.9□□□□□ -0.34
GAPDH-204ENST00000396859 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
GAPDH-204ENST00000396859 BLACEA4D250 179 aa12.89□□□□□ -0.35
GAPDH-204ENST00000396859 DYNC1I1O14576 645 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms