RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MAP3K7O43318 606 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 ULK1O75385 1050 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 EEDO75530 441 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 SLC16A8O95907 504 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 KRT6AP02538 564 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 KRT6BP04259 564 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 IMPA1P29218 277 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 DLSTP36957 453 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 BDKRB1P46663 353 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 KRT6CP48668 564 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 POLR2JP52435 117 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 ZNF33BQ06732 778 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 TRAP1Q12931 704 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 MAD2L1Q13257 205 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 RFTN2Q52LD8 501 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 SAMD4BQ5PRF9 694 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 CAPN13Q6MZZ7 669 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 GALNT6Q8NCL4 622 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 KLHL6Q8WZ60 621 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 CXorf40BQ96DE9 158 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 RNF31Q96EP0 1072 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 HBEGFQ99075 208 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 RAB11FIP5Q9BXF6 653 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 RAB33BQ9H082 229 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 ACTL8Q9H568 366 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 FARSBQ9NSD9 589 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 ZNF490Q9ULM2 529 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 USP9YO00507 2555 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-205ENST00000396545 PRORSD1PA6NEY8 169 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 FGF5P12034 268 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 JAK1P23458 1154 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PRPH2P23942 346 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 HALP42357 657 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 FOXK1P85037 733 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 TRIM25Q14258 630 aaKnown RBP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 TLR1Q15399 786 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SPATS1Q496A3 300 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 IL23RQ5VWK5 629 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 LIPJQ5W064 366 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 CYP20A1Q6UW02 462 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 DHDDSQ86SQ9 333 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 RNF148Q8N7C7 305 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 ZDHHC12Q96GR4 267 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 ZNF570Q96NI8 536 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 LEF1Q9UJU2 399 aaPredicted RBP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC22A14Q9Y267 594 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 KCNMB2Q9Y691 235 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 C9JVG2 144 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PRAMEF4O60810 478 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 ERGP11308 486 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 G6PDP11413 515 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 NDUFS1P28331 727 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC7A2P52569 658 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SRSF1Q07955 248 aaKnown RBP eCLIP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PRKG2Q13237 762 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 NAE1Q13564 534 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 CACHD1Q5VU97 1274 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PRAMEF9Q5VWM5 478 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 IRGCQ6NXR0 463 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 ZFP1Q6P2D0 407 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 FAM92BQ6ZTR7 304 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 THOC6Q86W42 341 aaKnown RBP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PPFIBP2Q8ND30 876 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 HIPK4Q8NE63 616 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 ZNF480Q8WV37 535 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 LRRC58Q96CX6 371 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 PCBD2Q9H0N5 130 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SEMA5BQ9P283 1151 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 SNX6Q9UNH7 406 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 POLR3HQ9Y535 204 aaPredicted RBP16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 KCNE2Q9Y6J6 123 aa16.64■□□□□ 0.25
TNFSF13-205ENST00000396545 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 CLGNO14967 610 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 BAG2O95816 211 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 NPPAP01160 153 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 ACADSP16219 412 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PCSK2P16519 638 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 MSX2P35548 267 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PNLIPRP1P54315 467 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PPP1CAP62136 330 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 TAF11Q15544 211 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 IGFBP7Q16270 282 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 C10orf62Q5T681 223 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 SYTL1Q8IYJ3 562 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 BHLHE22Q8NFJ8 381 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 SPDYE1Q8NFV5 336 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 DNAJC9Q8WXX5 260 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PYCR2Q96C36 320 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC39A3Q9BRY0 314 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 SGPP1Q9BX95 441 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 ACPTQ9BZG2 426 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 ATG10Q9H0Y0 220 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 LRTM1Q9HBL6 345 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 C1orf109Q9NX04 203 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 MCM8Q9UJA3 840 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms