RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 HCN3Q9P1Z3 774 aa20.16■□□□□ 0.82
FXN-202ENST00000396364 FARSAQ9Y285 508 aaKnown RBP20.16■□□□□ 0.82
FXN-202ENST00000396364 TMED5Q9Y3A6 229 aa20.16■□□□□ 0.82
FXN-202ENST00000396364 IGLV3-12A0A075B6K2 115 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 C1QTNF9BB2RNN3 333 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 NPIPB8E9PQR5 432 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 RTCAO00442 366 aaKnown RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 KLK10O43240 276 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 CHST10O43529 356 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 TLX3O43711 291 aaPredicted RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 SEC22BO75396 215 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 C1QTNF9P0C862 333 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 CERS1P27544 350 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 MAPK1P28482 360 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 BSGP35613 385 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 BUD31P41223 144 aaPredicted RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 XCR1P46094 333 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 GSTM5P46439 218 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 MC1RQ01726 317 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 BTKQ06187 659 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 MAD2L1Q13257 205 aaPredicted RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 CLN3Q13286 438 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 SLAMF1Q13291 335 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 PDCD2Q16342 344 aaPredicted RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 MRPL14Q6P1L8 145 aaKnown RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 COMMD6Q7Z4G1 85 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 UBE3DQ7Z6J8 389 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 C1orf52Q8N6N3 182 aaKnown RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 ENDOVQ8N8Q3 282 aaKnown RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 C7orf57Q8NEG2 295 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 CHTF18Q8WVB6 975 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 TBC1D20Q96BZ9 403 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
FXN-202ENST00000396364 TGIF2Q9GZN2 237 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 WDR41Q9HAD4 459 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 LRTM1Q9HBL6 345 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 PNPOQ9NVS9 261 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 DAPP1Q9UN19 280 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 PCDHGA6Q9Y5G7 932 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 SEC16AO15027 2179 aa20.15■□□□□ 0.82
FXN-202ENST00000396364 LOC101059948A0A1B0GTJ6 334 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 GNG14A0A1W2PPG7 69 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 C4orf51C9J302 202 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 CLDN4O14493 209 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 IGHEP01854 428 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 KLK1P06870 262 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 CYC1P08574 325 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 KITP10721 976 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 PTPN4P29074 926 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 FOLR3P41439 243 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 MAPK12P53778 367 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 RAB38P57729 211 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 MAT1AQ00266 395 aaKnown RBP20.14■□□□□ 0.81
FXN-202ENST00000396364 TBL3Q12788 808 aaKnown RBP20.14■□□□□ 0.81
FXN-202ENST00000396364 TGIF1Q15583 401 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 COX15Q7KZN9 410 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 PARP9Q8IXQ6 854 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 LRRC34Q8IZ02 419 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 CA13Q8N1Q1 262 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 DTWD1Q8N5C7 304 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 ZSCAN1Q8NBB4 408 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 STT3BQ8TCJ2 826 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 TUBGCP3Q96CW5 907 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 PEX11GQ96HA9 241 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 VPS50Q96JG6 964 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 TUBB1Q9H4B7 451 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 SIRT5Q9NXA8 310 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 MARCOQ9UEW3 520 aaPredicted RBP20.14■□□□□ 0.81
FXN-202ENST00000396364 MCM8Q9UJA3 840 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 NCOR2Q9Y618 2525 aa20.14■□□□□ 0.81
FXN-202ENST00000396364 SYNDIG1LA6NDD5 238 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 TCP11X1B4DZS4 312 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 PCDH17O14917 1159 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 PCDH7O60245 1069 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 B3GALT4O96024 378 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 FHP07954 510 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 ZGLP1P0C6A0 271 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 CPN2P22792 545 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 EIF2S3P41091 472 aaKnown RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 TRA2BP62995 288 aaKnown RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 OLR1P78380 273 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 GUCY1A3Q02108 690 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 NKG7Q16617 165 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 XKR7Q5GH72 579 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 MFSD4BQ5TF39 518 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 ZNF793Q6ZN11 406 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 ATG14Q6ZNE5 492 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 GPR180Q86V85 440 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 EFCAB3Q8N7B9 438 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 OR5T3Q8NGG3 340 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 CCNL2Q96S94 520 aaPredicted RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 CCDC134Q9H6E4 229 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 AKIRIN1Q9H9L7 192 aaPredicted RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 SLC22A11Q9NSA0 550 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 CTSFQ9UBX1 484 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 WBP11Q9Y2W2 641 aaKnown RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 PTRH2Q9Y3E5 179 aaKnown RBP20.13■□□□□ 0.81
FXN-202ENST00000396364 FER1L5A0AVI2 2057 aa20.13■□□□□ 0.81
FXN-202ENST00000396364 WDFY3Q8IZQ1 3526 aa20.12■□□□□ 0.81
FXN-202ENST00000396364 A0A0A6YYD5 115 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms