RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 C14orf166Q9Y224 244 aaKnown RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 DNMT3AQ9Y6K1 912 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-203ENST00000394872 GPR89AB7ZAQ6 455 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 CLPXO76031 633 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 GPR89BP0CG08 455 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 RBM34P42696 430 aaKnown RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 KCNC1P48547 511 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 GSK3BP49841 420 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF84P51523 738 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 NUDT6P53370 316 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLAMF1Q13291 335 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MSS51Q4VC12 460 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC36A4Q6YBV0 504 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 RNF111Q6ZNA4 994 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 C17orf50Q8WW18 174 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 NINJ1Q92982 152 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 IGSF8Q969P0 613 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 NECTIN4Q96NY8 510 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC22A4Q9H015 551 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MVB12BQ9H7P6 319 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC22A1O15245 554 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 BPNT1O95861 308 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 ENTPD1P49961 510 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 EIF5AP63241 154 aaKnown RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PLCXD2Q0VAA5 305 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 RUNX3Q13761 415 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 CWF19L1Q69YN2 538 aaKnown RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SMYD5Q6GMV2 418 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 EPGNQ6UW88 154 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF852Q6ZMS4 543 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 TOMM5Q8N4H5 51 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MCHR1Q99705 422 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 TIGARQ9NQ88 270 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PARPBPQ9NWS1 579 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 TAS2R1Q9NYW7 299 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 BAIAP2Q9UQB8 552 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 IFT52Q9Y366 437 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OARD1Q9Y530 152 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 KDM4BO94953 1096 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OR12D1P0DN82 309 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 TRAM2Q15035 370 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC35F1Q5T1Q4 408 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 REEP3Q6NUK4 255 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SSX6Q7RTT6 188 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PAQR7Q86WK9 346 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OR5T2Q8NGG2 359 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC22A8Q8TCC7 542 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 A0A1W2PP18 115 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SPARCP09486 303 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MPC1LP0DKB6 136 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 C1GALT1C1LP0DN25 315 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MLLT10P55197 1068 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PPP1R8Q12972 351 aaKnown RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 GALNT15Q8N3T1 639 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OR1F2PQ96R84 312 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 TTTY10Q9BZA0 68 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 PCDHB16Q9NRJ7 776 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 POU2F3Q9UKI9 436 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 LOC100509620A0A075B734 347 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC16A5O15375 505 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OR2B3O76000 313 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 XRCC1P18887 633 aaPredicted RBP10.01□□□□□ -0.81
COL4A6-203ENST00000394872 HRH2P25021 359 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 ABHD18Q0P651 414 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 ALG10Q5BKT4 473 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 FOXRED2Q8IWF2 684 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 OR8H3Q8N146 312 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 NUP43Q8NFH3 380 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 C15orf40Q8WUR7 153 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 DNAJA3Q96EY1 480 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 SLC6A15Q9H2J7 730 aa10.01□□□□□ -0.81
COL4A6-203ENST00000394872 CIB4A0PJX0 185 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 EPOP01588 193 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 PVALBP20472 110 aaPredicted RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 RAB28P51157 221 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 S100A10P60903 97 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 RPS15P62841 145 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 CST6Q15828 149 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 SGCAQ16586 387 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 C1orf189Q5VU69 101 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 BEND4Q6ZU67 534 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 SORCS1Q8WY21 1168 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 CCDC120Q96HB5 630 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 BARD1Q99728 777 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 ADAMTS10Q9H324 1103 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FEZF1A0PJY2 475 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF840PA6NDX5 716 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 ARL6IP5O75915 188 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OAZ2O95190 189 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 CKMT2P17540 419 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 CD9P21926 228 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 GLP1RP43220 463 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 NR0B1P51843 470 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 CTBP2P56545 445 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 RING1Q06587 406 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms