RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 C11orf65Q8NCR3 313 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 UCN3Q969E3 161 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 WFDC6Q9BQY6 131 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 NECTIN3Q9NQS3 549 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 ABCB10Q9NRK6 738 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 ADPRHL2Q9NX46 363 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PCDHGA2Q9Y5H1 932 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CCDC88CQ9P219 2028 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 DOCK9Q9BZ29 2069 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SPINT1O43278 529 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 HSMCR30P0CW71 290 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TGM1P22735 817 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PCGF2P35227 344 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 OPRD1P41143 372 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CXCR4P61073 352 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 C2orf80Q0P641 193 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SCARB2Q14108 478 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF284Q2VY69 593 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 LEXMQ3ZCV2 418 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TTC23LQ6PF05 361 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 DPPA4Q7L190 304 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 P3H2Q8IVL5 708 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CPA6Q8N4T0 437 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TRAM1L1Q8N609 369 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 DNAJC5GQ8N7S2 189 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PPP1R14BQ96C90 147 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 EPYCQ99645 322 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 DSN1Q9H410 356 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SPASTQ9UBP0 616 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 PSORS1C1Q9UIG5 152 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 BTNL2Q9UIR0 455 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 SNX11Q9Y5W9 270 aa12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 CFAP20Q9Y6A4 193 aaKnown RBP12.9□□□□□ -0.34
GTF2F1-201ENST00000394456 TSPAN11A1L157 253 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 A8MU76 341 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 RFXAPO00287 272 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 PRMT3O60678 531 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 C1orf105O95561 183 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 SOD1P00441 154 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 GGT2P36268 569 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 HNF4AP41235 474 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 UTS2BQ765I0 119 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 TRAPPC5Q8IUR0 188 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 DNAJC22Q8N4W6 341 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 Q96MT0 163 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 CCM2Q9BSQ5 444 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 CENPOQ9BU64 300 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 ZSCAN5AQ9BUG6 496 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 GABARAPL3Q9BY60 117 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 RAB23Q9ULC3 237 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 PCDHGB3Q9Y5G1 929 aa12.9□□□□□ -0.35
GTF2F1-201ENST00000394456 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 H3BM21 787 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 DSCR3O14972 297 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 AIREO43918 545 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 ATG13O75143 517 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 RB1P06400 928 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 SPNP16150 400 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 PBX2P40425 430 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 PRLHRP49683 370 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 CLK1P49759 484 aaKnown RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 DCDC1P59894 354 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 DUSP7Q16829 419 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 TIGD6Q17RP2 521 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 MED27Q6P2C8 311 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 ETFBKMTQ8IXQ9 262 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 MCFD2Q8NI22 146 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 C16orf78Q8WTQ4 265 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 HTRA1Q92743 480 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 FGF13Q92913 245 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 PADI2Q9Y2J8 665 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 SNX8Q9Y5X2 465 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 HSPE1-MOB4S4R3N1 261 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 PIPSLA2A3N6 862 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 WASHC1A8K0Z3 465 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 KPNA4O00629 521 aaPredicted RBP12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 UGDHO60701 494 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 STATHP02808 62 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 IL3P08700 152 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 FURINP09958 794 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 POU1F1P28069 291 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 CD40LGP29965 261 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 NFE2L1Q14494 772 aa12.89□□□□□ -0.35
GTF2F1-201ENST00000394456 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms