RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PIGSQ96S52 555 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HSD17B14Q9BPX1 270 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RTKNQ9BST9 563 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 POLR3GLQ9BT43 218 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 URM1Q9BTM9 101 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ZSCAN5AQ9BUG6 496 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 NUP85Q9BW27 656 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TARS2Q9BW92 718 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 GTPBP2Q9BX10 602 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 CARD6Q9BX69 1037 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 OR2B2Q9GZK3 357 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 USP44Q9H0E7 712 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PARP12Q9H0J9 701 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RAB6CQ9H0N0 254 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ALX4Q9H161 411 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SIL1Q9H173 461 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 DCTPP1Q9H773 170 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PTGES2Q9H7Z7 377 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 LINC00574Q9H8X3 128 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 WDR41Q9HAD4 459 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TRPV4Q9HBA0 871 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RAVER2Q9HCJ3 691 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 BPIFA1Q9NP55 256 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 LTB4R2Q9NPC1 389 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 IL1RAPQ9NPH3 570 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MED4Q9NPJ6 270 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 TIGARQ9NQ88 270 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 EXOSC3Q9NQT5 275 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HELLSQ9NRZ9 838 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SACM1LQ9NTJ5 587 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ACSS1Q9NUB1 689 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MKS1Q9NXB0 559 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SPHK1Q9NYA1 384 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 C6orf203Q9P0P8 240 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 DPM3Q9P2X0 92 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNN3Q9UGI6 736 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 NRBP1Q9UHY1 535 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 LCMT1Q9UIC8 334 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF639Q9UID6 485 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 OSGIN1Q9UJX0 560 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS6KA6Q9UK32 745 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 PILRAQ9UKJ1 303 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MKLN1Q9UL63 735 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 DNPEPQ9ULA0 475 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 HSF4Q9ULV5 492 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 NAP1L2Q9ULW6 460 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MRPS18CQ9Y3D5 142 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF115Q9Y4L5 304 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SPEF1Q9Y4P9 236 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MRFAP1Q9Y605 127 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 USP9XQ93008 2570 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MXRA5Q9NR99 2828 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 FAT3Q8TDW7 4589 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MN1Q10571 1320 aaPredicted RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 MAP3K15Q6ZN16 1313 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SH3TC1Q8TE82 1336 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 SALL1Q9NSC2 1324 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 FER1L4A9Z1Z3 1794 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC88CQ9P219 2028 aa-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 FASNP49327 2511 aaKnown RBP-0.45□□□□□ -2.48
TRAJ28-201ENST00000390509 BRWD1Q9NSI6 2320 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 JMJD1CQ15652 2540 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TRGV2A0A075B6R0 118 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV3OR16-8A0A075B7F1 116 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A088AWK7 358 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV1D-13A0A0B4J2D9 117 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV3D-7A0A0C4DH55 119 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV3OR2-268A0A0C4DH90 116 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A1B0GUH1 482 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 FRMD3A2A2Y4 597 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR2M5A3KFT3 312 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 GRIFINA4D1Z8 144 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 IGLON5A6NGN9 336 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF98A6NK75 572 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C2orf81A6NN90 581 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LEUTXA8MZ59 168 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 KIF28PB7ZC32 967 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 C9JVG2 144 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 E9PI62 339 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 LY6LH3BQJ8 138 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 H7C0S8 307 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 H7C417 338 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 K7EMT4 169 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 K7ESF4 209 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 M0QZ24 198 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 UBXN8O00124 270 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SULT2B1O00204 365 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF103O00237 685 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 O00370 1275 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 VCYO14598 125 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 PPP1R12AO14974 1030 aaPredicted RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF263O14978 683 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TAPBPO15533 448 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RBFOX2O43251 390 aaKnown RBP eCLIP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBTB43O43298 467 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 THAP12O43422 761 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 TSPAN6O43657 245 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 OR10H2O60403 315 aa-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 RNASEH1O60930 286 aaKnown RBP-0.46□□□□□ -2.48
TRAJ28-201ENST00000390509 SDC3O75056 442 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms