RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 LIM2P55344 173 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 SLC26A5P58743 744 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 TAS2R50P59544 299 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 PHEXP78562 749 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 GTF2H2Q13888 395 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 TMEM35AQ53FP2 167 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 LIPJQ5W064 366 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 GTF2H2CQ6P1K8 395 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 CHSY3Q70JA7 882 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 FAM47BQ8NA70 645 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 CATSPER1Q8NEC5 780 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 SRFBP1Q8NEF9 429 aaKnown RBP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 OR7G3Q8NG95 312 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 MTBPQ96DY7 904 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 PHF21BQ96EK2 531 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 CMTM7Q96FZ5 175 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 TBCDQ9BTW9 1192 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 MRPL46Q9H2W6 279 aaKnown RBP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 IPPKQ9H8X2 491 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 L2HGDHQ9H9P8 463 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 MMP25Q9NPA2 562 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 NECTIN3Q9NQS3 549 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 PRTFDC1Q9NRG1 225 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 ASF1BQ9NVP2 202 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 PLA2G3Q9NZ20 509 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 ADGRE2Q9UHX3 823 aa8.4□□□□□ -1.06
TRBV27-201ENST00000390399 MRPS33Q9Y291 106 aaKnown RBP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 COPG1Q9Y678 874 aaKnown RBP8.4□□□□□ -1.06
TRBV27-201ENST00000390399 CPAMD8Q8IZJ3 1885 aa8.4□□□□□ -1.07
TRBV27-201ENST00000390399 HELZ2Q9BYK8 2649 aaKnown RBP8.4□□□□□ -1.07
TRBV27-201ENST00000390399 DOCK10Q96BY6 2186 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TRAV17A0A0B4J275 112 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 OR5H15A6NDH6 313 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SAGE2PA6NJ88 616 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TCP11X1B4DZS4 312 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 STX16-NPEPL1H3BU86 382 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SAP18O00422 153 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 RTCAO00442 366 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 CLDN4O14493 209 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 STX16O14662 325 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 UGDHO60701 494 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TGFB1P01137 390 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 HIST1H1TP22492 207 aaPredicted RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SSR2P43308 183 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TNFSF10P50591 281 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 RAP1GDS1P52306 607 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 HNRNPFP52597 415 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 HSD17B7P56937 341 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SLC13A2Q13183 592 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 RCN2Q14257 317 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SLC29A2Q14542 456 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 NR6A1Q15406 480 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ACER2Q5QJU3 275 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 KHDRBS2Q5VWX1 349 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 FCRLBQ6BAA4 426 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 H3F3CQ6NXT2 135 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ADGRD1Q6QNK2 874 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ZNF793Q6ZN11 406 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 UBE3DQ7Z6J8 389 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 CLNKQ7Z7G1 428 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 CRLF3Q8IUI8 442 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ZNF595Q8IYB9 648 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 BEST3Q8N1M1 668 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 RNF175Q8N4F7 328 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SLC5A8Q8N695 610 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 EIF1ADQ8N9N8 165 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 OR1N1Q8NGS0 311 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 HUS1BQ8NHY5 278 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SUN3Q8TAQ9 357 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 HAS2Q92819 552 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ATP6V1E2Q96A05 226 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 REPS1Q96D71 796 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ZNF354BQ96LW1 612 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 CSF3RQ99062 836 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 MTERF1Q99551 399 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 MRPL57Q9BQC6 102 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 CENPKQ9BS16 269 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 NOL11Q9H8H0 719 aaKnown RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 LYRM4Q9HD34 91 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 DMRT3Q9NQL9 472 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 PRDM7Q9NQW5 492 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 AGPAT4Q9NRZ5 378 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 STMN3Q9NZ72 180 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 ABI3Q9P2A4 366 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 PSMC3IPQ9P2W1 217 aaPredicted RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 PCTPQ9UKL6 214 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 DAPP1Q9UN19 280 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 NTNG1Q9Y2I2 539 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 PCDHGA11Q9Y5H2 935 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 SPACA6W5XKT8 324 aa8.39□□□□□ -1.07
TRBV27-201ENST00000390399 UBR5O95071 2799 aaPredicted RBP8.39□□□□□ -1.07
TRBV27-201ENST00000390399 IQANK1A0A1B0GTG1 560 aa8.38□□□□□ -1.07
TRBV27-201ENST00000390399 SYNDIG1LA6NDD5 238 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms