RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TMEM198Q66K66 360 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PPP2R2DQ66LE6 453 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 FOXR2Q6PJQ5 311 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GSG1LQ6UXU4 331 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GDPD4Q6W3E5 623 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 IRF2BP2Q7Z5L9 587 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF100Q8IYN0 542 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZDHHC1Q8WTX9 485 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SPRYD4Q8WW59 207 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 MTFR1LQ9H019 292 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 BTBD1Q9H0C5 482 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GPATCH2Q9NW75 528 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CACNG4Q9UBN1 327 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CYP8B1Q9UNU6 501 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZFR2Q9UPR6 939 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 PBRM1Q86U86 1689 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MYOCOSA0A1B0GUC4 107 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SH3PXD2BA1X283 911 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 H3BSA7 217 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RFPL1O75677 317 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 DGKZQ13574 1117 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 DEFB115Q30KQ5 88 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF404Q494X3 552 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 FAM205BPQ63HN1 556 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 LCLAT1Q6UWP7 414 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CYP4V2Q6ZWL3 525 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TMPRSS12Q86WS5 348 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TMEM151AQ8N4L1 468 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MR1Q95460 341 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 OR8D2Q9GZM6 311 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLC17A6Q9P2U8 582 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SERTAD3Q9UJW9 196 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CLEC4EQ9ULY5 219 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CEMIPQ8WUJ3 1361 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PIP5K1CO60331 668 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 IFNA17P01571 189 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TMEM11P17152 192 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PRKACGP22612 351 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 NAA10P41227 235 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 TAS2R39P59534 338 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MALLQ13021 153 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 FLYWCH1Q4VC44 716 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 BORAQ6PGQ7 559 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PAQR3Q6TCH7 311 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLC24A5Q71RS6 500 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TAC4Q86UU9 113 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZC3HC1Q86WB0 502 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 ALDH16A1Q8IZ83 802 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 OR13C4Q8NGS5 318 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF675Q8TD23 568 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PCED1BQ96HM7 432 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ASF1BQ9NVP2 202 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RLIMQ9NVW2 624 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 COQ3Q9NZJ6 369 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF536O15090 1300 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GGT3PA6NGU5 568 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CD8B2A6NJW9 211 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CAPN5O15484 640 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 TREHO43280 583 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CDC123O75794 336 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 SNAPC5O75971 98 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MMP3P08254 477 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 F7P08709 466 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 CD8BP10966 210 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SELPP16109 830 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 THBS2P35442 1172 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 INHBEP58166 350 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RAB8AP61006 207 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 LIPKQ5VXJ0 399 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PRSS55Q6UWB4 352 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 USP50Q70EL3 339 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 LINC00471Q8N535 108 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 OR10T2Q8NGX3 314 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 EBF4Q9BQW3 602 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 URM1Q9BTM9 101 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 BIN3Q9NQY0 253 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GPRC5BQ9NZH0 403 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 KCNIP1Q9NZI2 227 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TLR6Q9Y2C9 796 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ENDOUP21128 410 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 DNASE1P24855 282 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 OR1E2P47887 323 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 RPS13P62277 151 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 LRRTM4Q86VH4 590 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 THOC6Q86W42 341 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 LIX1LQ8IVB5 337 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NEIL3Q8TAT5 605 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 THAP4Q8WY91 577 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SOCS2O14508 198 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SCO2O43819 266 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ATE1O95260 518 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SIX3O95343 332 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 C6orf47O95873 294 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 C8AP07357 584 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MMP8P22894 467 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 GDI1P31150 447 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 GGT5P36269 586 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 FRG2Q64ET8 278 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms