RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GMCL1P1Q8NEA9 526 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 OR14A16Q8NHC5 309 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF675Q8TD23 568 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 WFIKKN2Q8TEU8 576 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ZC3HAV1LQ96H79 300 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 TEFMQ96QE5 360 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 H2AFJQ9BTM1 129 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ABCB9Q9NP78 766 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 NDRG2Q9UN36 371 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 BTBD17A6NE02 478 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 LDLRAD4O15165 306 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SOX30O94993 753 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SLC2A2P11168 524 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 CKBP12277 381 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ITGB5P18084 799 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 MIPP30301 263 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 CARD18P57730 90 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 NFYCQ13952 458 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 RAB6CQ53S08 254 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 XKR3Q5GH77 459 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SAPCD1Q5SSQ6 148 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 BCL2L15Q5TBC7 163 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 DCBLD1Q8N8Z6 715 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 OR5B17Q8NGF7 314 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 STK35Q8TDR2 534 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 RNF139Q8WU17 664 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM125Q96AQ2 219 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ATG4CQ96DT6 458 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 GPR78Q96P69 363 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 CNPPD1Q9BV87 410 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 ASPNQ9BXN1 380 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 RAB6CQ9H0N0 254 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 NCOR1P1Q9H4R4 102 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 SLC28A3Q9HAS3 691 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 FBRSL1Q9HCM7 1045 aaKnown RBP9.01□□□□□ -0.97
PTPRA-204ENST00000380393 GABRQQ9UN88 632 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
PTPRA-204ENST00000380393 OR6C68A6NDL8 312 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 URADA6NGE7 173 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 APOC4-APOC2K7ER74 178 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 PPEF2O14830 753 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 PGK1P00558 417 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 APOC2P02655 101 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 C4BPBP20851 252 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 YWHAQP27348 245 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 SDC4P31431 198 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 CASP2P42575 452 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 SUOXP51687 545 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 BACE1P56817 501 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 HTRA4P83105 476 aaPredicted RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 ELP6Q0PNE2 266 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 USF2Q15853 346 aaPredicted RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 TIMM50Q3ZCQ8 353 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 REC114Q7Z4M0 266 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 PTRH1Q86Y79 214 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 MOSPD2Q8NHP6 518 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 IL31RAQ8NI17 732 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ARMC5Q96C12 935 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 CERS2Q96G23 380 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 WDFY2Q96P53 400 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 KLHL31Q9H511 634 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 OPA3Q9H6K4 179 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 OR6C75A6NL08 312 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 SEC14L5O43304 696 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 SERPINA1P01009 418 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ERCC2P18074 760 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 CXCL3P19876 107 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 HRH2P25021 359 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 RBP2P50120 134 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 RORCP51449 518 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 SKP2Q13309 424 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ILKQ13418 452 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 GBX1Q14549 363 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 NR6A1Q15406 480 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 TBCEQ15813 527 aaPredicted RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 CCDC157Q569K6 752 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 TPGS2Q68CL5 300 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 NAA40Q86UY6 237 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ANKRD46Q86W74 232 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 KLBQ86Z14 1044 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 THEM5Q8N1Q8 247 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 DNAJC5GQ8N7S2 189 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 BTN2A2Q8WVV5 523 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 UCN3Q969E3 161 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF419Q96HQ0 510 aaPredicted RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 MFSD14AQ96MC6 490 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM74Q96NL1 305 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 METTL9Q9H1A3 318 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 REEP4Q9H6H4 257 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 AMBNQ9NP70 447 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 NRBP2Q9NSY0 501 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 MTMR10Q9NXD2 777 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 WWOXQ9NZC7 414 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 PCDHB10Q9UN67 800 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF451Q9Y4E5 1061 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms