RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 KLK4Q9Y5K2 254 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 C2CD3Q4AC94 2353 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 FREM3P0C091 2139 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TLN2Q9Y4G6 2542 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TRAV17A0A0B4J275 112 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SUPT3HB4E1H0 165 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 H0YIG0 161 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 PSMD12O00232 456 aaPredicted RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SUPT3HO75486 399 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ITGA10O75578 1167 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 URI1O94763 535 aaPredicted RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 IPO13O94829 963 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 C1QAP02745 245 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CELA3AP09093 270 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SLC35E2BP0CK96 405 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CD1DP15813 335 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 STMN1P16949 149 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TFEBP19484 476 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TCEA1P23193 301 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CASQ1P31415 396 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SOX11P35716 441 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SCTRP47872 440 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SLC26A5P58743 744 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 GUCY2DQ02846 1103 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CHIT1Q13231 466 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 PRAMEF20Q5VT98 475 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 C18orf63Q68DL7 685 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 LCTLQ6UWM7 567 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ZDHHC24Q6UX98 284 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SLCO4C1Q6ZQN7 724 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CEP128Q6ZU80 1094 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 PCGF5Q86SE9 256 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 GSPT2Q8IYD1 628 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MMP21Q8N119 569 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 APCDD1LQ8NCL9 501 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 AGAP11Q8TF27 550 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MS4A6EQ96DS6 147 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 NSUN5Q96P11 429 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MAPKAP1Q9BPZ7 522 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TGIF2Q9GZN2 237 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ZNF700Q9H0M5 742 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 DEPPQ9NTK1 212 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 EHD3Q9NZN3 535 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 RNF112Q9ULX5 631 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CLDN16Q9Y5I7 305 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MRFAP1Q9Y605 127 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 KCNE1BA0A087WTH5 132 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 LOC102723996A0A087X1L8 192 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 A0A1B0GTH9 108 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 C2orf72A6NCS6 295 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CCNDBP1O95273 360 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ETHE1O95571 254 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 GNAZP19086 355 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TPP2P29144 1249 aaPredicted RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 HSD17B2P37059 387 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MSH2P43246 934 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 AGFG1P52594 562 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CDH13P55290 713 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 GARNL3Q5VVW2 1013 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 DUPD1Q68J44 220 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 BICRALQ6AI39 1079 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 PLAG1Q6DJT9 500 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ISCA2Q86U28 154 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 CA13Q8N1Q1 262 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TMEM156Q8N614 296 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 LRRN4CLQ8ND94 238 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ST6GALNAC3Q8NDV1 305 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 OR4K1Q8NGD4 311 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 OR52B6Q8NGF0 335 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ANP32BQ92688 251 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 MVB12AQ96EY5 273 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 FAR2Q96K12 515 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 UTP23Q9BRU9 249 aaKnown RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 TUBB6Q9BUF5 446 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 VPS11Q9H270 941 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 RHOJQ9H4E5 214 aa4.36□□□□□ -1.71
C9orf72-203ENST00000380003 SEMA4BQ9NPR2 832 aaPredicted RBP4.36□□□□□ -1.71
C9orf72-203ENST00000380003 ABCA2Q9BZC7 2435 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 PRRC2AP48634 2157 aaKnown RBP4.35□□□□□ -1.71
C9orf72-203ENST00000380003 WIPF3A6NGB9 483 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 ANKDD1BA6NHY2 528 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 ZNF839A8K0R7 811 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 C17orf51A8MQB3 221 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 KDM4EB2RXH2 506 aaPredicted RBP4.35□□□□□ -1.71
C9orf72-203ENST00000380003 NPIPA2E9PIF3 369 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 POC1B-GALNT4F8VUJ3 575 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 NPIPA3F8WFD2 350 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 GOLGA8RI6L899 631 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
C9orf72-203ENST00000380003 OR6B1O95007 311 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 ONECUT2O95948 504 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 TPOP07202 933 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 TNNI3P19429 210 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 MAGEA4P43358 317 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 IRF8Q02556 426 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 RGS1Q08116 209 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 ASPHQ12797 758 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 HERC3Q15034 1050 aa4.35□□□□□ -1.71
C9orf72-203ENST00000380003 TEX35Q5T0J7 233 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms