RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ZIC2O95409 532 aaPredicted RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 HSPA4LO95757 839 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 IGHEP01854 428 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 CHRNGP07510 517 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 HIST1H1TP22492 207 aaPredicted RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 JAK1P23458 1154 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 ITPKBP27987 946 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 CCR10P46092 362 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 XCR1P46094 333 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 ABCE1P61221 599 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 PPP2R2AP63151 447 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SNRPNP63162 240 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 STX3Q13277 289 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SGO1Q5FBB7 561 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 ATG16L1Q676U5 607 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 INO80CQ6PI98 192 aaPredicted RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 RNF165Q6ZSG1 346 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 PAGE2Q7Z2X7 111 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 CLYBLQ8N0X4 340 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 RNF175Q8N4F7 328 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SNRNP27Q8WVK2 155 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 VPS50Q96JG6 964 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 IP6K3Q96PC2 410 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SPSB2Q99619 263 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 CCT7Q99832 543 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SHCBP1LQ9BZQ2 653 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 MED4Q9NPJ6 270 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 PFDN4Q9NQP4 134 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SEMA3GQ9NS98 782 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 FARSBQ9NSD9 589 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 VPS29Q9UBQ0 182 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 ADAM29Q9UKF5 820 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 PTRH2Q9Y3E5 179 aaKnown RBP11.27□□□□□ -0.61
PCNA-201ENST00000379143 TRAF6Q9Y4K3 522 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 TIMM22Q9Y584 194 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 SPACA6W5XKT8 324 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
PCNA-201ENST00000379143 A0A0G2JN53 185 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 ZNF860A6NHJ4 632 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 PSMD12O00232 456 aaPredicted RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 CHST10O43529 356 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 CNOT3O75175 753 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 SH3BGRLO75368 114 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 ETHE1O95571 254 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 BGNP21810 368 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 ATP5A1P25705 553 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 SLC1A6P48664 564 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 FOXA1P55317 472 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 RPS18P62269 152 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 MAT1AQ00266 395 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 KLC1Q07866 573 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 SRSF6Q13247 344 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 ABRAXAS2Q15018 415 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 UGT8Q16880 541 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 IMPG1Q17R60 797 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 SYT16Q17RD7 645 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 SPIN4Q56A73 249 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 VWA2Q5GFL6 755 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 SH2D4BQ5SQS7 431 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 MED25Q71SY5 747 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 UBE3DQ7Z6J8 389 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 NUDT13Q86X67 352 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 RAB43Q86YS6 212 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 CA13Q8N1Q1 262 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 ZCCHC7Q8N3Z6 543 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 ACOT4Q8N9L9 421 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 C7orf57Q8NEG2 295 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 THAP4Q8WY91 577 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 TBC1D20Q96BZ9 403 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 METTL2AQ96IZ6 378 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 CATSPER2Q96P56 530 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 KCNA7Q96RP8 456 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 CRB3Q9BUF7 120 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 ILKAPQ9H0C8 392 aaPredicted RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 SOX17Q9H6I2 414 aaPredicted RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 DDX31Q9H8H2 851 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 MS4A12Q9NXJ0 267 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 DAPP1Q9UN19 280 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 MRPS33Q9Y291 106 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 RAP2CQ9Y3L5 183 aa11.26□□□□□ -0.61
PCNA-201ENST00000379143 MRPS18BQ9Y676 258 aaKnown RBP11.26□□□□□ -0.61
PCNA-201ENST00000379143 URB1O60287 2271 aaKnown RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 ARHGAP10A1A4S6 786 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 BLACEA4D250 179 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 SYNDIG1LA6NDD5 238 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 IDSB3KWA1 339 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 SLC28A1O00337 649 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 RTCAO00442 366 aaKnown RBP11.25□□□□□ -0.61
PCNA-201ENST00000379143 KLF11O14901 512 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 RGS14O43566 566 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 B3GALT4O96024 378 aa11.25□□□□□ -0.61
PCNA-201ENST00000379143 HEXBP07686 556 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms