RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SLC16A8O95907 504 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
GNE-201ENST00000377902 CBLP22681 906 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 XCR1P46094 333 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 FRMPD2BQ6IN97 320 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 CHTF18Q8WVB6 975 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 OVCA2Q8WZ82 227 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 PIP5K1AQ99755 562 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 CCDC32Q9BV29 185 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 C1GALT1Q9NS00 363 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 PAQR5Q9NXK6 330 aaPredicted RBP17.23■□□□□ 0.35
GNE-201ENST00000377902 B4GALT6Q9UBX8 382 aa17.23■□□□□ 0.35
GNE-201ENST00000377902 ZNF282Q9UDV7 671 aaPredicted RBP17.23■□□□□ 0.35
GNE-201ENST00000377902 TRBV4-1A0A0J9YWV2 114 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 A0A1W2PQ09 198 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 FFAR1O14842 300 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 CRISP1P54107 249 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 CDK6Q00534 326 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 GPNMBQ14956 572 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 RPS26P11Q5JNZ5 115 aaPredicted RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 CELF5Q8N6W0 485 aaKnown RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 FYTTD1Q96QD9 318 aaKnown RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 PHOX2BQ99453 314 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 TMEM246Q9BRR3 403 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 SPATA9Q9BWV2 254 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 RSPO3Q9BXY4 272 aaPredicted RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 CLN6Q9NWW5 311 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 STOX2Q9P2F5 926 aaPredicted RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 SH2B3Q9UQQ2 575 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 FAM172BPA6NC97 362 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 ZAR1LA6NP61 321 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 CSO75390 466 aaKnown RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 MPC1LP0DKB6 136 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 LIMS1P48059 325 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 SPINT3P49223 89 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 AP1S2P56377 157 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 RPS26P62854 115 aaKnown RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 MEF2AQ02078 507 aaPredicted RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 ANXA8L1Q5VT79 327 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 SLC44A2Q8IWA5 706 aaPredicted RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 GALNT12Q8IXK2 581 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 ASCC1Q8N9N2 400 aaKnown RBP17.22■□□□□ 0.35
GNE-201ENST00000377902 NEIL2Q969S2 332 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 SUV39H2Q9H5I1 410 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 LRFN2Q9ULH4 789 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 CORO2BQ9UQ03 480 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 YIPF1Q9Y548 306 aa17.22■□□□□ 0.35
GNE-201ENST00000377902 TRBC2A0A5B9 178 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 MEIOCA2RUB1 952 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CENPXA8MT69 81 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 RNASET2O00584 256 aaKnown RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 TGFB1P01137 390 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 IL7P13232 177 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CD72P21854 359 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 TIE1P35590 1138 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CRYBB2P43320 205 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 LIM2P55344 173 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 C21orf58P58505 322 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 Q5BKY6 102 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 GRHL2Q6ISB3 625 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 TMPRSS11AQ6ZMR5 421 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 USP45Q70EL2 814 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 DNAJB7Q7Z6W7 309 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 RAB43Q86YS6 212 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 ST13P5Q8NFI4 369 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 WDR48Q8TAF3 677 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 TMEM203Q969S6 136 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 ZNF334Q9HCZ1 680 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 DYRK4Q9NR20 520 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CRNNQ9UBG3 495 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 MYOFQ9NZM1 2061 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 H0YIV9 168 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CSF2P04141 144 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CYP17A1P05093 508 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CLEC2LP0C7M8 214 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 PPIBP23284 216 aaKnown RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 SSTR4P31391 388 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 TIA1P31483 386 aaKnown RBP eCLIP17.21■□□□□ 0.35
GNE-201ENST00000377902 SOAT1P35610 550 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CHI3L1P36222 383 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 OPRD1P41143 372 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 ASMTP46597 345 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 EEF1A2Q05639 463 aaKnown RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 PUM1Q14671 1186 aaKnown RBP eCLIP17.21■□□□□ 0.35
GNE-201ENST00000377902 SNAP47Q5SQN1 464 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 KIAA1841Q6NSI8 718 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 ARMCX6Q7L4S7 300 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 TMPRSS11BQ86T26 416 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 NLRP8Q86W28 1048 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CHST14Q8NCH0 376 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 CLP1Q92989 425 aaKnown RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 DEPDC7Q96QD5 511 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 OR51B5Q9H339 312 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 RANGRFQ9HD47 186 aaPredicted RBP17.21■□□□□ 0.35
GNE-201ENST00000377902 THSD1Q9NS62 852 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 KLHL42Q9P2K6 505 aa17.21■□□□□ 0.35
GNE-201ENST00000377902 KLHL20Q9Y2M5 609 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms