RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 LYPLAL1Q5VWZ2 237 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 XKRXQ6PP77 449 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 GDPGP1Q6ZNW5 385 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 CHST9Q7L1S5 443 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 BCDIN3DQ7Z5W3 292 aaKnown RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 C1orf52Q8N6N3 182 aaKnown RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 GPR26Q8NDV2 337 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 NLGN4YQ8NFZ3 816 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 OR4K1Q8NGD4 311 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PIP5K1AQ99755 562 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 POLR2J2Q9GZM3 115 aaKnown RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 ACSL6Q9UKU0 697 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 Q9Y3F1 56 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 A8MVJ9 347 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 TNFRSF21O75509 655 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PCSK2P16519 638 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 IDSP22304 550 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SPAM1P38567 509 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 OR3A3P47888 321 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SNRPD2P62316 118 aaKnown RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 NKX3-2P78367 333 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF385BQ569K4 471 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PYDC2Q56P42 97 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SLC38A6Q8IZM9 456 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 FAM46DQ8NEK8 389 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 VPS37AQ8NEZ2 397 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 BTN2A2Q8WVV5 523 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PTPN18Q99952 460 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 TMEM121BQ9BXQ6 578 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PRM3Q9NNZ6 103 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SSR3Q9UNL2 185 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 AP1M2Q9Y6Q5 423 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SCN10AQ9Y5Y9 1956 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 LOC105371267A0A1B0GV96 52 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 C2orf78A6NCI8 922 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 MPZL2O60487 215 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 TPST2O60704 377 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 STC2O76061 302 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 ANXA4P09525 319 aaPredicted RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 ERP29P30040 261 aaKnown RBP15.81■□□□□ 0.12
TRIM39-201ENST00000376656 IL12RB1P42701 662 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 NSG1P42857 185 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 PFN3P60673 137 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 QPRTQ15274 297 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 WDR45BQ5MNZ6 344 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 WDR20Q8TBZ3 569 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 CREB3L4Q8TEY5 395 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 ASB11Q8WXH4 323 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SLC25A46Q96AG3 418 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 RETREG1Q9H6L5 497 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 NDUFB11Q9NX14 153 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 SNX11Q9Y5W9 270 aa15.81■□□□□ 0.12
TRIM39-201ENST00000376656 TSPAN19P0C672 248 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 MSL3P1P0C860 447 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 ITGB7P26010 798 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 C21orf58P58505 322 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 XKR6Q5GH73 641 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 ABI3BPQ7Z7G0 1075 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 PEX5LQ8IYB4 626 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 TCTE3Q8IZS6 198 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 OR4M1Q8NGD0 313 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 ENKURQ8TC29 256 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 DEDD2Q8WXF8 326 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 KLHL6Q8WZ60 621 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 C11orf24Q96F05 449 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-201ENST00000376656 GPR62Q9BZJ7 368 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 FZD3Q9NPG1 666 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 SPATA6Q9NWH7 488 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-201ENST00000376656 PLEKHB1Q9UF11 243 aaPredicted RBP15.8■□□□□ 0.12
TRIM39-201ENST00000376656 CCDC88CQ9P219 2028 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 TLR4O00206 839 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 COCHO43405 550 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 AP2A2O94973 939 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 SOX14O95416 240 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 IFNA8P32881 189 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 GZMKP49863 264 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 HBA1P69905 142 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 GPR33Q49SQ1 333 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 GCNT6Q5T4J0 391 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 TRIM69Q86WT6 500 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 PHC2Q8IXK0 858 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 GPR156Q8NFN8 814 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 TMEM203Q969S6 136 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 TMEM80Q96HE8 168 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 PARK7Q99497 189 aaKnown RBP15.8■□□□□ 0.12
TRIM39-201ENST00000376656 FAM83DQ9H4H8 585 aa15.8■□□□□ 0.12
TRIM39-201ENST00000376656 E7EQ34 232 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 SMAD6O43541 496 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 HNMTP50135 292 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 TATDN3Q17R31 274 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 GPR65Q8IYL9 337 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 OR9Q1Q8NGQ5 310 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 SLC6A18Q96N87 628 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ZIC5Q96T25 663 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 TXNL4BQ9NX01 149 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF282Q9UDV7 671 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 NINQ8N4C6 2090 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 SMLR1H3BR10 107 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms