RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 EFCAB8A8MWE9 144 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 E7ESA3 106 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 FANCGO15287 622 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 EIF3HO15372 352 aaKnown RBP eCLIP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 ITGA10O75578 1167 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 SERPINB1P30740 379 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PTGS2P35354 604 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 MEOX1P50221 254 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 MTTPP55157 894 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 TAS2R39P59534 338 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 HYAL2Q12891 473 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 CBLBQ13191 982 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 SERTAD2Q14140 314 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 TGFBIQ15582 683 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 TSNQ15631 228 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 ELAVL1Q15717 326 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 ARHGAP11AQ6P4F7 1023 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 ANKMY2Q8IV38 441 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 CPSF7Q8N684 471 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 APCDD1LQ8NCL9 501 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 C16orf52Q8NHV5 167 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 CHTF18Q8WVB6 975 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 ASB5Q8WWX0 329 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 MS4A6EQ96DS6 147 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PTCD3Q96EY7 689 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 SPOCK3Q9BQ16 436 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 KLHL31Q9H511 634 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PLAC1Q9HBJ0 212 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 SLC24A3Q9HC58 644 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PRM3Q9NNZ6 103 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 DNAJC11Q9NVH1 559 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 HPF1Q9NWY4 346 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 TRMT1Q9NXH9 659 aaKnown RBP13.77□□□□□ -0.21
HDAC6-204ENST00000376643 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 CLCA3PQ9Y6N3 262 aa13.77□□□□□ -0.21
HDAC6-204ENST00000376643 DYRK3O43781 588 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 PEX1O43933 1283 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 STK16O75716 305 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 STMN1P16949 149 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 GGT5P36269 586 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 KCNC1P48547 511 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ADPRMQ3LIE5 342 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ZNF468Q5VIY5 522 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-204ENST00000376643 GPSM1Q86YR5 675 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 SULF2Q8IWU5 870 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ZBED8Q8IZ13 594 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ZFP62Q8NB50 900 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-204ENST00000376643 OR5L2Q8NGL0 311 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 OR14A16Q8NHC5 309 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 FAM57AQ8TBR7 257 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 ANP32BQ92688 251 aaKnown RBP13.76□□□□□ -0.21
HDAC6-204ENST00000376643 C14orf79Q96F83 325 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 CAPZA3Q96KX2 299 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 LURAP1Q96LR2 239 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 KCNC2Q96PR1 638 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 CPNE1Q99829 537 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 TP63Q9H3D4 680 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-204ENST00000376643 PSAT1Q9Y617 370 aa13.76□□□□□ -0.21
HDAC6-204ENST00000376643 A8MUA0 341 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 FOXO6A8MYZ6 492 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 CTNSO60931 367 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 B3GALT4O96024 378 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 IFNA16P05015 189 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 TPOP07202 933 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 GSTA2P09210 222 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 COX7A2P14406 83 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 GNG11P61952 73 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 TBL3Q12788 808 aaKnown RBP13.75□□□□□ -0.21
HDAC6-204ENST00000376643 STX4Q12846 297 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 BIKQ13323 160 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 PDK4Q16654 411 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 TMEM35AQ53FP2 167 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 HSDL2Q6YN16 418 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 GK5Q6ZS86 529 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 CYS1Q717R9 158 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 DOLPP1Q86YN1 238 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 CEP97Q8IW35 865 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 SHISA5Q8N114 240 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 MORN4Q8NDC4 146 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 OR8K3Q8NH51 312 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 NCLNQ969V3 563 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 DMRTA2Q96SC8 542 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 WDR83Q9BRX9 315 aaKnown RBP13.75□□□□□ -0.21
HDAC6-204ENST00000376643 CENPKQ9BS16 269 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 TRIM8Q9BZR9 551 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 TRIM31Q9BZY9 425 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 LYRM4Q9HD34 91 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 IKZF3Q9UKT9 509 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 DAPP1Q9UN19 280 aa13.75□□□□□ -0.21
HDAC6-204ENST00000376643 FAM187AA6NFU0 413 aa13.74□□□□□ -0.21
HDAC6-204ENST00000376643 NCF1BA6NI72 391 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-204ENST00000376643 NCF1CA8MVU1 366 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms