RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CERS1P27544 350 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 HPDP32754 393 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 ST13P50502 369 aaKnown RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 MTTPP55157 894 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 RAB38P57729 211 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 TLR1Q15399 786 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 EXT1Q16394 746 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 LGSNQ5TDP6 509 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 GRHL2Q6ISB3 625 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 GOLGA7Q7Z5G4 137 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 MYLK4Q86YV6 388 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 PTGR2Q8N8N7 351 aaPredicted RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 UBE2E3Q969T4 207 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 PHF21BQ96EK2 531 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 SERINC2Q96SA4 455 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 MS4A8Q9BY19 250 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 EPB41L4BQ9H329 900 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 IPPKQ9H8X2 491 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 ACTR8Q9H981 624 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 TNPO3Q9Y5L0 923 aaKnown RBP13.38□□□□□ -0.27
CLCN6-203ENST00000376490 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
CLCN6-203ENST00000376490 A0A088AWK7 358 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 IGKV3D-11A0A0A0MRZ8 115 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TCRBV16S1A1N1A0A5B0 115 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MAN1A2O60476 641 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 SBK3P0C264 359 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MYBL2P10244 700 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 ZNF10P21506 573 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 EEF1DP29692 281 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TSFMP43897 325 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TNFSF10P50591 281 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 LIM2P55344 173 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 SLC26A5P58743 744 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TGM3Q08188 693 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MRPL49Q13405 166 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 DDX39BQ13838 428 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 UBAP2LQ14157 1087 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TSNAXIP1Q2TAA8 658 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TEX35Q5T0J7 233 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 LIPJQ5W064 366 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 ZNF793Q6ZN11 406 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 CHSY3Q70JA7 882 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 CRLF3Q8IUI8 442 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TMEM151AQ8N4L1 468 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 FAM47BQ8NA70 645 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 HUS1BQ8NHY5 278 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 ZNF354BQ96LW1 612 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MTERF1Q99551 399 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 NPAS2Q99743 824 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 TBCDQ9BTW9 1192 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 OR51B5Q9H339 312 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 NOL11Q9H8H0 719 aaKnown RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 COPS7BQ9H9Q2 264 aaPredicted RBP13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MMP25Q9NPA2 562 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 PRTFDC1Q9NRG1 225 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 KCMF1Q9P0J7 381 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 XPR1Q9UBH6 696 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 DAPP1Q9UN19 280 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 RNF11Q9Y3C5 154 aa13.37□□□□□ -0.27
CLCN6-203ENST00000376490 MYOCOSA0A1B0GUC4 107 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 TGFBR3LH3BV60 316 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CYR61O00622 381 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 OR7A17O14581 309 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 SMIM24O75264 130 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CBX6O95503 412 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 PIK3CGP48736 1102 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 SLC13A2Q13183 592 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 NR6A1Q15406 480 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CPSF6Q16630 551 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 EIF2S3LQ2VIR3 472 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ACER2Q5QJU3 275 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 DEPDC1Q5TB30 811 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 KHDRBS2Q5VWX1 349 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 TIFABQ6ZNK6 161 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 KIF2BQ8N4N8 673 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 SRFBP1Q8NEF9 429 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ARMC2Q8NEN0 867 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 NFAM1Q8NET5 270 aaPredicted RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 GRHL3Q8TE85 626 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 ATP6V1E2Q96A05 226 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 KCNC2Q96PR1 638 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CDK15Q96Q40 435 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 CSF3RQ99062 836 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 BARD1Q99728 777 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
CLCN6-203ENST00000376490 MRPL57Q9BQC6 102 aaKnown RBP13.36□□□□□ -0.27
CLCN6-203ENST00000376490 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms