RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 GSTM3P21266 225 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 SEC23BQ15437 767 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 C3orf33Q6P1S2 294 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 GKN2Q86XP6 184 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 TGM7Q96PF1 710 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 FZD8Q9H461 694 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 HRASLS2Q9NWW9 162 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 POU2F3Q9UKI9 436 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 PADI2Q9Y2J8 665 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 WDR45Q9Y484 360 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 A0A0A6YYH2 397 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 A6NJ64 397 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 LEFTY2O00292 366 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 EEF1E1O43324 174 aaKnown RBP13.23□□□□□ -0.29
COL4A1-201ENST00000375820 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF776Q68DI1 518 aaPredicted RBP13.23□□□□□ -0.29
COL4A1-201ENST00000375820 SLC9B2Q86UD5 537 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 SAMD12Q8N8I0 201 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 ZFP41Q8N8Y5 198 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 ACDQ96AP0 544 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
COL4A1-201ENST00000375820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 GABBR2O75899 941 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 PAK4O96013 591 aaPredicted RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ACVR1BP36896 505 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 FASLGP48023 281 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 AADACL4Q5VUY2 407 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 OR51A7Q8NH64 312 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 PNPLA2Q96AD5 504 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZBTB48P10074 688 aaPredicted RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 CHRFAM7AQ494W8 412 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TMEM107Q6UX40 140 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ADGRD2Q7Z7M1 963 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SMPDL3AQ92484 453 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 MCHR1Q99705 422 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SERTAD3Q9UJW9 196 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 NPIPA2E9PIF3 369 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 NPIPA3F8WFD2 350 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 NDUFS1P28331 727 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 EIF5AP63241 154 aaKnown RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SNTA1Q13424 505 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 KCNJ11Q14654 390 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 C22orf39Q6P5X5 142 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SCGB3A2Q96PL1 93 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 KCNN3Q9UGI6 736 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 AQP12BA6NM10 295 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 M0R129 80 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 GRID2O43424 1007 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 KLF8O95600 359 aaPredicted RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 LCN1P31025 176 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 LY6G5CQ5SRR4 150 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 BRAT1Q6PJG6 821 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 CRTC1Q6UUV9 634 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 AQP12AQ8IXF9 295 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TMEM151AQ8N4L1 468 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 MAPK15Q8TD08 544 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 BEST1O76090 585 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 YES1P07947 543 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SLC11A1P49279 550 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZNF81P51508 661 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 C14orf80Q86SX3 495 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TRMT10AQ8TBZ6 339 aaKnown RBP13.22□□□□□ -0.29
COL4A1-201ENST00000375820 S100PBPQ96BU1 408 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 P2RY13Q9BPV8 354 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SLC30A2Q9BRI3 323 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 CD244Q9BZW8 370 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZDHHC18Q9NUE0 388 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ISPDA4D126 451 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 OR6C74A6NCV1 312 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TVP23AA6NH52 213 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 A6NLC8 198 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 NR4A2P43354 598 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZBED5Q49AG3 693 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 TPGS2Q68CL5 300 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 MAFIPQ8WZ33 124 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 HSPA12BQ96MM6 686 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 ZIM2Q9NZV7 527 aa13.22□□□□□ -0.29
COL4A1-201ENST00000375820 IQGAP1P46940 1657 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 SWT1Q5T5J6 900 aaKnown RBP13.21□□□□□ -0.29
COL4A1-201ENST00000375820 HMBOX1Q6NT76 420 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 IGDCC3Q8IVU1 814 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 OR9A1PQ8NGU1 263 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 FN3KQ9H479 309 aa13.21□□□□□ -0.29
COL4A1-201ENST00000375820 ZFR2Q9UPR6 939 aaKnown RBP13.21□□□□□ -0.29
COL4A1-201ENST00000375820 FAM159BA6NKW6 160 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms