RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 RAD23AP54725 363 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TBPL1P62380 186 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 BIRC2Q13490 618 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TSTA3Q13630 321 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 HKDC1Q2TB90 917 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 BCL7AQ4VC05 210 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TPRG1LQ5T0D9 272 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 BROXQ5VW32 411 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 CPZQ66K79 652 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ANKRD34AQ69YU3 496 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 MED27Q6P2C8 311 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 TMEM26Q6ZUK4 368 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ABI3BPQ7Z7G0 1075 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 SLC22A18ASQ8N1D0 253 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 GPR156Q8NFN8 814 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF420Q8TAQ5 688 aaPredicted RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF480Q8WV37 535 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 HDAC2Q92769 488 aaKnown RBP14.87□□□□□ -0.03
CCDC40-202ENST00000374876 IL21RQ9HBE5 538 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 PCDHGA8Q9Y5G5 932 aa14.87□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF292O60281 2723 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 GPR1P46091 355 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 ARHGDIAP52565 204 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 NUP107P57740 925 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 RAE1P78406 368 aaKnown RBP14.86□□□□□ -0.03
CCDC40-202ENST00000374876 HLA-BQ31612 363 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 RFX4Q33E94 735 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 C11orf91Q3C1V1 193 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 GPR107Q5VW38 600 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 RAET1GQ6H3X3 334 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 PNCKQ6P2M8 343 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 SHQ1Q6PI26 577 aaKnown RBP14.86□□□□□ -0.03
CCDC40-202ENST00000374876 SLCO4C1Q6ZQN7 724 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 FBXO15Q8NCQ5 510 aaPredicted RBP14.86□□□□□ -0.03
CCDC40-202ENST00000374876 DENND6BQ8NEG7 585 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 CHTF18Q8WVB6 975 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 TUBA1CQ9BQE3 449 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 TPT1P8Q9HAU6 139 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 IL1RAPQ9NPH3 570 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 GULP1Q9UBP9 304 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 BAG5Q9UL15 447 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 DYRK1BQ9Y463 629 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 PCDHB11Q9Y5F2 797 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 GVINP1Q7Z2Y8 2422 aa14.86□□□□□ -0.03
CCDC40-202ENST00000374876 LOC100130705A0A1B0GUX0 176 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 GABRR3A8MPY1 467 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 YY2O15391 372 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 SOD1P00441 154 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 SYPP08247 313 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 IL7RP16871 459 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 EFNA1P20827 205 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CRHBPP24387 322 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 DCKP27707 260 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 KDELR2P33947 212 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CTSKP43235 329 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 RPS13P62277 151 aaKnown RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 GTF2H3Q13889 308 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ANXA8L1Q5VT79 327 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 R3HCC1LQ7Z5L2 792 aaKnown RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 IQCHQ86VS3 1027 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 GAREM1Q9H706 876 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 BTNL2Q9UIR0 455 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 BLOC1S6Q9UL45 172 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 BTBD3Q9Y2F9 522 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 PCDH15Q96QU1 1955 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CDX4O14627 284 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 NOL3O60936 208 aaKnown RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CPNE6O95741 557 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 FABP3P05413 133 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CDK4P11802 303 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 TIA1P31483 386 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 NXPH1P58417 271 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CTBSQ01459 385 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 MEP1AQ16819 746 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF658BQ4V348 819 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ZNF542PQ5EBM4 170 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 C6orf141Q5SZD1 244 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 OR2T5Q6IEZ7 315 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 PTOV1Q86YD1 416 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 DCP2Q8IU60 420 aaKnown RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CHDHQ8NE62 594 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 OR2T29Q8NH02 315 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 DPH2Q9BQC3 489 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-202ENST00000374876 APOOQ9BUR5 198 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 EDEM2Q9BV94 578 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 LGR4Q9BXB1 951 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ASPSCR1Q9BZE9 553 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ABCG2Q9UNQ0 655 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 CORO2BQ9UQ03 480 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 ERVK-11Q9UQG0 969 aa14.85□□□□□ -0.03
CCDC40-202ENST00000374876 TMEM131Q92545 1883 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-202ENST00000374876 MYO1GB0I1T2 1018 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 PCDH7O60245 1069 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 ABCB7O75027 752 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 FKBP9O95302 570 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 PPIBP23284 216 aaKnown RBP14.84□□□□□ -0.03
CCDC40-202ENST00000374876 IGFBP5P24593 272 aa14.84□□□□□ -0.03
CCDC40-202ENST00000374876 POLR2IP36954 125 aaKnown RBP14.84□□□□□ -0.03
CCDC40-202ENST00000374876 RABIFP47224 123 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms