RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TRIT1Q9H3H1 467 aaKnown RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 OR1A2Q9Y585 309 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 GMEB1Q9Y692 573 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 NUP214P35658 2090 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 A0A1W2PRB8 838 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CHURC1-FNTBB4DL54 471 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 KMOO15229 486 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ABCB7O75027 752 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SEMG1P04279 462 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 IL3P08700 152 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 TDGF1P13385 188 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CYP4B1P13584 511 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CXCR2P25025 360 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 RYKP34925 604 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 FNTBP49356 437 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 DAPP51397 102 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CLCNKAP51800 687 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 NUP107P57740 925 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ISL1P61371 349 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 PDE7AQ13946 482 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 CTU2Q2VPK5 515 aaKnown RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 COX20Q5RI15 118 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 TRIM40Q6P9F5 258 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 FAM129CQ86XR2 697 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 ATG16L2Q8NAA4 619 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SETD9Q8NE22 299 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SPPL2AQ8TCT8 520 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 AIF1LQ9BQI0 150 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 DOHHQ9BU89 302 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 GABARAPL1Q9H0R8 117 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SLC6A17Q9H1V8 727 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 TAS2R9Q9NYW1 312 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 TSC22D4Q9Y3Q8 395 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 SNX5Q9Y5X3 404 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-202ENST00000374487 AP1M2Q9Y6Q5 423 aa11.55□□□□□ -0.56
HMGCL-202ENST00000374487 PTGES3LE9PB15 166 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 CPNE6O95741 557 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 PAK4O96013 591 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ITGAMP11215 1152 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 DCKP27707 260 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SOAT1P35610 550 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ITGA1P56199 1179 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 TAS2R38P59533 333 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 CYP4F2P78329 520 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 GCNT6Q5T4J0 391 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 AGBL4Q5VU57 503 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 KDM4DQ6B0I6 523 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 IKBIPQ70UQ0 350 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 PIWIL3Q7Z3Z3 882 aaKnown RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SLC9B2Q86UD5 537 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 RAB42Q8N4Z0 105 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ZNF513Q8N8E2 541 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 BPIFB6Q8NFQ5 453 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 OR52N2Q8NGI0 321 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 GANCQ8TET4 914 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 DCUN1D5Q9BTE7 237 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SORBS1Q9BX66 1292 aaKnown RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 PCBD2Q9H0N5 130 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 RSPH9Q9H1X1 276 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 MBNL1Q9NR56 388 aaKnown RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 EXD2Q9NVH0 621 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 THUMPD1Q9NXG2 353 aaKnown RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 MAP4K5Q9Y4K4 846 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 KIAA1549LQ6ZVL6 1849 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 LRRK1Q38SD2 2015 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 A0A1W2PP55 124 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 PRR23AA6NEV1 266 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ADH1BP00325 375 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 AGXTP21549 392 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 C5AR1P21730 350 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 EIF2DP41214 584 aaKnown RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 RXRGP48443 463 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 CCR8P51685 355 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 RPS6KA3P51812 740 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SELENOWP63302 87 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 RAPSNQ13702 412 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 KIAA1211LQ6NV74 962 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 VN1R5Q7Z5H4 357 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SPARTQ8N0X7 666 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 OXR1Q8N573 874 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 FRMD1Q8N878 549 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 SMPDL3AQ92484 453 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 KLK6Q92876 244 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 MAGED4Q96JG8 741 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 NRTNQ99748 197 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 CCDC90BQ9GZT6 254 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-202ENST00000374487 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ACSL6Q9UKU0 697 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 ACSL5Q9ULC5 683 aa11.54□□□□□ -0.56
HMGCL-202ENST00000374487 H3BMQ9 156 aa11.53□□□□□ -0.56
HMGCL-202ENST00000374487 H7BY64 318 aa11.53□□□□□ -0.56
HMGCL-202ENST00000374487 JRKO75564 520 aa11.53□□□□□ -0.56
HMGCL-202ENST00000374487 KRT75O95678 551 aa11.53□□□□□ -0.56
HMGCL-202ENST00000374487 C9P02748 559 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms