RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 KIF25Q9UIL4 384 aa13.75□□□□□ -0.21
A1CF-202ENST00000373993 ZNF490Q9ULM2 529 aaPredicted RBP13.75□□□□□ -0.21
A1CF-202ENST00000373993 ZNF175Q9Y473 711 aa13.75□□□□□ -0.21
A1CF-202ENST00000373993 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
A1CF-202ENST00000373993 H7C4K7 107 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 OTCP00480 354 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 LRG1P02750 347 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ESR1P03372 595 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 HMGN1P05114 100 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
A1CF-202ENST00000373993 OR4Q2P0C623 313 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 C4BPBP20851 252 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 RAB14P61106 215 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 PPP3R1P63098 170 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 SMARCB1Q12824 385 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 NR6A1Q15406 480 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.74□□□□□ -0.211e-5■□□□□ 9.3
A1CF-202ENST00000373993 EML3Q32P44 896 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 PLAG1Q6DJT9 500 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 SLC8B1Q6J4K2 584 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 GALNT10Q86SR1 603 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ZNF461Q8TAF7 563 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 METTL6Q8TCB7 284 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 EXT2Q93063 718 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 BARHL1Q9BZE3 327 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 IKZF5Q9H5V7 419 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 IFT22Q9H7X7 185 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 PADI2Q9Y2J8 665 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 NOTCH4Q99466 2003 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 WASHC1A8K0Z3 465 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 MYO1GB0I1T2 1018 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 MEN1O00255 615 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ADAMDEC1O15204 470 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ATG13O75143 517 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 RPP40O75818 363 aaKnown RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 TGM6O95932 706 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 HLA-DQB2P05538 268 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 LAMP2P13473 410 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ATF6P18850 670 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ZP3P21754 424 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 KDELR2P33947 212 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 SOX9P48436 509 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 STC1P52823 247 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 EPHA4P54764 986 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 IL1RL1Q01638 556 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 NCF4Q15080 339 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 TSTQ16762 297 aaKnown RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 PIM3Q86V86 326 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 RYBPQ8N488 228 aaPredicted RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 TOP6BLQ8N6T0 577 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ZNF366Q8N895 744 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 OR7D4Q8NG98 312 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 UFD1Q92890 307 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 HGDQ93099 445 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 GIMAP5Q96F15 307 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 EXOC2Q96KP1 924 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ANKRA2Q9H9E1 313 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 LYARQ9NX58 379 aaKnown RBP13.74□□□□□ -0.21
A1CF-202ENST00000373993 PCDHB8Q9UN66 801 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ABCG2Q9UNQ0 655 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 SNX8Q9Y5X2 465 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 ANKRD12Q6UB98 2062 aa13.74□□□□□ -0.21
A1CF-202ENST00000373993 DMDP11532 3685 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 A0A1B0GTL3 188 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 LOC285095A0A1B0GVY8 99 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 OR5K4A6NMS3 321 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 PIRO00625 290 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 PRPS2P11908 318 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 HLA-EP13747 358 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 GLULP15104 373 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 ARSBP15848 533 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 SDC2P34741 201 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 PPP1R8Q12972 351 aaKnown RBP13.73□□□□□ -0.21
A1CF-202ENST00000373993 SSX1Q16384 188 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 FAM174BQ3ZCQ3 159 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 ZNF628Q5EBL2 1059 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 HACD4Q5VWC8 232 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 C9orf57Q5W0N0 161 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 IL27RAQ6UWB1 636 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 TMEM107Q6UX40 140 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 FAM92BQ6ZTR7 304 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 TRIM48Q8IWZ4 208 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 FGF13Q92913 245 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 ULK4Q96C45 1275 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 OPALINQ96PE5 141 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 OR52E6Q96RD3 313 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 KCNJ15Q99712 375 aa13.73□□□□□ -0.21
A1CF-202ENST00000373993 BARD1Q99728 777 aaKnown RBP13.73□□□□□ -0.21
A1CF-202ENST00000373993 RNF167Q9H6Y7 350 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms