RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 COQ4Q9Y3A0 265 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 GLOD5A6NK44 160 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SLC15A1P46059 708 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 HERVK_113P63132 956 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ERVK-8P63133 956 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TAS1R3Q7RTX0 852 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 OR6N1Q8NGY5 312 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ERVK-6Q9BXR3 956 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 LAMP5Q9UJQ1 280 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TRIM64CA6NLI5 447 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 CSF2P04141 144 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SEC23BQ15437 767 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 C1orf52Q8N6N3 182 aaKnown RBP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SHKBP1Q8TBC3 707 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SLC6A7Q99884 636 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM121BQ9BXQ6 578 aaPredicted RBP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 DNAJC27Q9NZQ0 273 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 VPS29Q9UBQ0 182 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 PCDHGB2Q9Y5G2 931 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF860A6NHJ4 632 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM233B4DJY2 109 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 GRID2O43424 1007 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TIMP1P01033 207 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 NDUFS1P28331 727 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SLC35F1Q5T1Q4 408 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 LRRN1Q6UXK5 716 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 LAS2Q8IYD9 372 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 THAP3Q8WTV1 239 aaPredicted RBP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 C7orf43Q8WVR3 580 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 POLE4Q9NR33 117 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 HSPB11Q9Y547 144 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 H3BSA7 217 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 EPCAMP16422 314 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 CLRN1P58418 232 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 Q6ZVL8 140 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 TRIM73Q86UV7 250 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SLC2A4RGQ9NR83 387 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 SLC39A1Q9NY26 324 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 EDARQ9UNE0 448 aa13.82□□□□□ -0.2
TRAF1-201ENST00000373887 GJA5P36382 358 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CD97P48960 835 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ACSBG2Q5FVE4 666 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CANT1Q8WVQ1 401 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 S100A16Q96FQ6 103 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 AKTIPQ9H8T0 292 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 GLS2Q9UI32 602 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CDC14AQ9UNH5 594 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CXorf49A8MYA2 514 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 RP2O75695 350 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CYBAP13498 195 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CREB1P16220 341 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 BMP8BP34820 402 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 GPR33Q49SQ1 333 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 SLC16A9Q7RTY1 509 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 BMP8AQ7Z5Y6 402 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 SCAMP4Q969E2 229 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 C16orf58Q96GQ5 468 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 TGM7Q96PF1 710 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ASPNQ9BXN1 380 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 EIF5A2Q9GZV4 153 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF701Q9NV72 531 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 RNGTTO60942 597 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CAV3P56539 151 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 MLLT1Q03111 559 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM40Q8WWA1 233 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 EPYCQ99645 322 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 EIF2B3Q9NR50 452 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 TAS2R10Q9NYW0 307 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 GPR34Q9UPC5 381 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM236Q5W0B7 351 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 IQCKQ8N0W5 287 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 C9orf43Q8TAL5 461 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 CAPN14A8MX76 684 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 FAM72CH0Y354 149 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 RNF13O43567 381 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 HEXBP07686 556 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 PRKACGP22612 351 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF81P51508 661 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 SNU13P55769 128 aaKnown RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 ST3GAL4Q11206 333 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 NECAB3Q96P71 396 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 PEBP4Q96S96 227 aa13.81□□□□□ -0.2
TRAF1-201ENST00000373887 TREX2Q9BQ50 279 aaPredicted RBP13.81□□□□□ -0.2
TRAF1-201ENST00000373887 PIAS3Q9Y6X2 628 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms