RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NDUFA9Q16795 377 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CCSMST1Q4G0I0 132 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 C9orf50Q5SZB4 431 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 C6orf141Q5SZD1 244 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 OTUD3Q5T2D3 398 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF648Q5T619 568 aaPredicted RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF691Q5VV52 312 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 KIAA1614Q5VZ46 1190 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CRTC3Q6UUV7 619 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SPESP1Q6UW49 350 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 RBM44Q6ZP01 1051 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SATL1Q86VE3 508 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PARP8Q8N3A8 854 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SDR16C5Q8N3Y7 309 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF366Q8N895 744 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 LMNTD1Q8N9Z9 388 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 OR5AR1Q8NGP9 310 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 OR2A1Q8NGT9 310 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MIPOL1Q8TD10 442 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 RSC1A1Q92681 617 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SIPA1Q96FS4 1042 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 C7orf34Q96L11 122 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 C12orf66Q96MD2 445 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 WDR92Q96MX6 357 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 OR2M4Q96R27 311 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MYADMQ96S97 322 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 SH3GL3Q99963 347 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 EBPLQ9BY08 206 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 GABARAPL3Q9BY60 117 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TOR3AQ9H497 397 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF556Q9HAH1 456 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MRPS30Q9NP92 439 aaKnown RBP8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 PLCXD1Q9NUJ7 323 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 TAC3Q9UHF0 121 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 POFUT2Q9Y2G5 429 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 NAALAD2Q9Y3Q0 740 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 DGKBQ9Y6T7 804 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 MYOFQ9NZM1 2061 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 ALPK3Q96L96 1907 aa8.32□□□□□ -1.08
SNRNP40-202ENST00000373720 CKAP5Q14008 2032 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3DA0A087WVF3 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3IA0A087WXS9 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3EA0A087X179 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3KA0A087X1G2 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A1W2PP55 124 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 SH3D21A4FU49 640 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 LRIT2A6NDA9 550 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 C5orf58C9J3I9 102 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PLPP1O14494 284 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CASC3O15234 703 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 NDUFS4O43181 175 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TNFSF14O43557 240 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 HS6ST1O60243 411 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PGM3O95394 542 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ETHE1O95571 254 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 SNAP29O95721 258 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PAK4O96013 591 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 GSNP06396 782 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 GUSBP08236 651 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3HP0C7X1 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 HOXB2P14652 356 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ETS2P15036 469 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ITIH1P19827 911 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PAX7P23759 505 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CRHBPP24387 322 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 NTSP30990 170 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 RRM2P31350 389 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CTHP32929 405 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 MPIP34949 423 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CDKN2CP42773 168 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 RABIFP47224 123 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ALDH9A1P49189 494 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 BLKP51451 505 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ADPRHP54922 357 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 DSTNP60981 165 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ISL1P61371 349 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CSNK1G2P78368 415 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PRR5P85299 388 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 RGS1Q08116 209 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 COX10Q12887 443 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 BIKQ13323 160 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TP53BP2Q13625 1128 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CEBPEQ15744 281 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ZSWIM7Q19AV6 140 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 POM121L1PQ3SYA9 428 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 LRRC23Q53EV4 343 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 SAXO2Q658L1 398 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3GQ6DHY5 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3CQ6IPX1 549 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 DHRS4L2Q6PKH6 230 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PARM1Q6UWI2 310 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms