RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SHISA5Q8N114 240 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 OR4F6Q8NGB9 312 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 CCDC126Q96EE4 140 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 THOC3Q96J01 351 aaKnown RBP11.32□□□□□ -0.6
HDAC8-201ENST00000373554 QRFPRQ96P65 431 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 TMEM237Q96Q45 408 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 TBCDQ9BTW9 1192 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 TUBB6Q9BUF5 446 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 ROPN1BQ9BZX4 212 aaPredicted RBP11.32□□□□□ -0.6
HDAC8-201ENST00000373554 LHPPQ9H008 270 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF700Q9H0M5 742 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 OR51B5Q9H339 312 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 ROPN1Q9HAT0 212 aaPredicted RBP11.32□□□□□ -0.6
HDAC8-201ENST00000373554 ZBTB26Q9HCK0 441 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 C5AR2Q9P296 337 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 MID2Q9UJV3 735 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 STK38LQ9Y2H1 464 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 SPACA6W5XKT8 324 aa11.32□□□□□ -0.6
HDAC8-201ENST00000373554 SMG1Q96Q15 3661 aaKnown RBP11.32□□□□□ -0.6
HDAC8-201ENST00000373554 SCN3AQ9NY46 2000 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 OR2W5A6NFC9 320 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CLDN4O14493 209 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 SLC28A2O43868 658 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PRMT3O60678 531 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 DPM1O60762 260 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 DNAJB6O75190 326 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 SH3BGRLO75368 114 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 SEC24DO94855 1032 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 SERPINA7P05543 415 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ICAM2P13598 275 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 IMPDH1P20839 514 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PTX3P26022 381 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CRHR1P34998 444 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PRKAA2P54646 552 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CDH13P55290 713 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RAB38P57729 211 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RPS13P62277 151 aaKnown RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CLCQ05315 142 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 IFT88Q13099 833 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF678Q5SXM1 525 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 DEPDC1Q5TB30 811 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 AGAP7PQ5VUJ5 663 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 FRG2Q64ET8 278 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ZYG11AQ6WRX3 759 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ATG14Q6ZNE5 492 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RIPOR1Q6ZS17 1223 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 SH2D5Q6ZV89 423 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RPS27LQ71UM5 84 aaKnown RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 MILR1Q7Z6M3 343 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ANKRD37Q7Z713 158 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 C4orf33Q8N1A6 199 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 CCDC63Q8NA47 563 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 FAM47BQ8NA70 645 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PLPP5Q8NEB5 264 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RDH11Q8TC12 318 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 TSLPQ969D9 159 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 RGMAQ96B86 450 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 L3HYPDHQ96EM0 354 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PTCHD1Q96NR3 888 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 AGAP4Q96P64 663 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 FRG2BQ96QU4 278 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 LPAR4Q99677 370 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ELOVL6Q9H5J4 265 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 ZNF552Q9H707 407 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PRDM7Q9NQW5 492 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 TRPS1Q9UHF7 1281 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 EMCNQ9ULC0 261 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 DAPP1Q9UN19 280 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 PLAAQ9Y263 795 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 MMACHCQ9Y4U1 282 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 BOD1L1Q8NFC6 3051 aa11.31□□□□□ -0.6
HDAC8-201ENST00000373554 IGHV3-20A0A0C4DH32 117 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 FOXE1O00358 373 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SAP18O00422 153 aaKnown RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 RTCAO00442 366 aaKnown RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SUV39H1O43463 412 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PLIN3O60664 434 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SCELO95171 688 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 MLYCDO95822 493 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PROCP04070 461 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 PRR35P0CG20 571 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 TSPAN8P19075 237 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ATP5A1P25705 553 aaKnown RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ARFIP1P53367 373 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 LIM2P55344 173 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 OR4D2P58180 307 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-201ENST00000373554 Q0VFX4 171 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 SLC13A2Q13183 592 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 CUL3Q13618 768 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 RUNX2Q13950 521 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 BTBD16Q32M84 506 aa11.3□□□□□ -0.6
HDAC8-201ENST00000373554 UNC50Q53HI1 259 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms