RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 AP5B1Q2VPB7 878 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 SGO1Q5FBB7 561 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 VWA2Q5GFL6 755 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 ABHD17CQ6PCB6 329 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 ZCCHC23Q6ZST2 131 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 RAB43Q86YS6 212 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 SERINC2Q96SA4 455 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 NPLQ9BXD5 320 aaPredicted RBP17.34■□□□□ 0.37
PBX3-205ENST00000373492 TGIF2Q9GZN2 237 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 SOX17Q9H6I2 414 aaPredicted RBP17.34■□□□□ 0.37
PBX3-205ENST00000373492 BRF2Q9HAW0 419 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 MAN2B2Q9Y2E5 1009 aa17.34■□□□□ 0.37
PBX3-205ENST00000373492 VSTM2BA6NLU5 285 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 MANBAO00462 879 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 UBFD1O14562 309 aaKnown RBP17.33■□□□□ 0.36
PBX3-205ENST00000373492 CNOT3O75175 753 aaKnown RBP17.33■□□□□ 0.36
PBX3-205ENST00000373492 SASH3O75995 380 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 IGHEP01854 428 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 HSD3B1P14060 373 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 HSD3B2P26439 372 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 SSR2P43308 183 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 XCR1P46094 333 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 MTTPP55157 894 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 CSTF3Q12996 717 aaKnown RBP17.33■□□□□ 0.36
PBX3-205ENST00000373492 KCNAB2Q13303 367 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 TTMPQ5BVD1 217 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 APLFQ8IW19 511 aaPredicted RBP17.33■□□□□ 0.36
PBX3-205ENST00000373492 OR5T3Q8NGG3 340 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 PEX11GQ96HA9 241 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 SPSB2Q99619 263 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 SHCBP1LQ9BZQ2 653 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 SEMA4CQ9C0C4 833 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 MLXIPLQ9NP71 852 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 FARSBQ9NSD9 589 aaKnown RBP17.33■□□□□ 0.36
PBX3-205ENST00000373492 AHSPQ9NZD4 102 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 TIMM22Q9Y584 194 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 DOCK10Q96BY6 2186 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 MED13Q9UHV7 2174 aa17.33■□□□□ 0.36
PBX3-205ENST00000373492 PSMD12O00232 456 aaPredicted RBP17.32■□□□□ 0.36
PBX3-205ENST00000373492 SAP18O00422 153 aaKnown RBP17.32■□□□□ 0.36
PBX3-205ENST00000373492 CHST10O43529 356 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 PRB1P04280 392 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 UROSP10746 265 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 RNH1P13489 461 aaKnown RBP17.32■□□□□ 0.36
PBX3-205ENST00000373492 OLR1P78380 273 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 KLC1Q07866 573 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 CHI3L2Q15782 390 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 MFSD4BQ5TF39 518 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 OR4C11Q6IEV9 310 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 SHISA6Q6ZSJ9 500 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 CUZD1Q86UP6 607 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 PRSS58Q8IYP2 241 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 MGARPQ8TDB4 240 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 NACC2Q96BF6 587 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 QRFPRQ96P65 431 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 IP6K3Q96PC2 410 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 OR1F2PQ96R84 312 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 KCNA7Q96RP8 456 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 CRB3Q9BUF7 120 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 PRDM7Q9NQW5 492 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 SEMA3GQ9NS98 782 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 SLC12A4Q9UP95 1085 aa17.32■□□□□ 0.36
PBX3-205ENST00000373492 TMEM114B3SHH9 223 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 PLPP1O14494 284 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 AZIN1O14977 448 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 KALRNO60229 2985 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 C1QL1O75973 258 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 SEMA3DO95025 777 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 BMP10O95393 424 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 CHEK2O96017 543 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 SERPINE1P05121 402 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 HEXBP07686 556 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 JAK1P23458 1154 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 GRK2P25098 689 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 ATP5A1P25705 553 aaKnown RBP17.31■□□□□ 0.36
PBX3-205ENST00000373492 CERS1P27544 350 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 OTX2P32243 289 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 FOXA1P55317 472 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 C19orf57Q0VDD7 668 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
PBX3-205ENST00000373492 TCHHL1Q5QJ38 904 aaPredicted RBP17.31■□□□□ 0.36
PBX3-205ENST00000373492 FAM69BQ5VUD6 431 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 UBE3DQ7Z6J8 389 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 ZC3H7AQ8IWR0 971 aaKnown RBP17.31■□□□□ 0.36
PBX3-205ENST00000373492 CA13Q8N1Q1 262 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 GBP7Q8N8V2 638 aaPredicted RBP17.31■□□□□ 0.36
PBX3-205ENST00000373492 ADAMTS18Q8TE60 1221 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 VPS50Q96JG6 964 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 ZNF446Q9NWS9 450 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 C3orf18Q9UK00 162 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 SPACA6W5XKT8 324 aa17.31■□□□□ 0.36
PBX3-205ENST00000373492 COL6A6A6NMZ7 2263 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 RTCAO00442 366 aaKnown RBP17.3■□□□□ 0.36
PBX3-205ENST00000373492 SNUPNO95149 360 aaKnown RBP17.3■□□□□ 0.36
PBX3-205ENST00000373492 ETHE1O95571 254 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 CHRNGP07510 517 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 UMODP07911 640 aa17.3■□□□□ 0.36
PBX3-205ENST00000373492 HIST1H1TP22492 207 aaPredicted RBP17.3■□□□□ 0.36
PBX3-205ENST00000373492 EMP2P54851 167 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms