RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FAM181AQ8N9Y4 354 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 SRFBP1Q8NEF9 429 aaKnown RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 KLHDC9Q8NEP7 349 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 ZNF431Q8TF32 576 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 NSMAFQ92636 917 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 TCEAL3Q969E4 200 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 COQ8BQ96D53 544 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CELF6Q96J87 481 aaKnown RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CAPNS2Q96L46 248 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 RBP7Q96R05 134 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 MCCC1Q96RQ3 725 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CPNE1Q99829 537 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 TRIM62Q9BVG3 475 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 PAPOLGQ9BWT3 736 aaKnown RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 KCNH6Q9H252 994 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 SMOC1Q9H4F8 434 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CAB39LQ9H9S4 337 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 DYRK4Q9NR20 520 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 DNAJC11Q9NVH1 559 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 MCUBQ9NWR8 336 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 CMTM6Q9NX76 183 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 SCN3BQ9NY72 215 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 TRPS1Q9UHF7 1281 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 PURGQ9UJV8 347 aaKnown RBP8.51□□□□□ -1.05
ATG4A-203ENST00000372232 ADAM30Q9UKF2 790 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 INVSQ9Y283 1065 aa8.51□□□□□ -1.05
ATG4A-203ENST00000372232 HTTP42858 3142 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ZCWPW2A0A1B0GU75 182 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 H7C2Y5 167 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 PROM1O43490 865 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 JCHAINP01591 159 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 RPLP0P05388 317 aaKnown RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 TM4SF4P48230 202 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 CLCN4P51793 760 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 PRKCZQ05513 592 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ZNF33AQ06730 810 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 GTF2H3Q13889 308 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ERV3-1Q14264 604 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 DMC1Q14565 340 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 LARS2Q15031 903 aaKnown RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ZNF79Q15937 498 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 TCTE1Q5JU00 501 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 TMEM201Q5SNT2 666 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 UBE2R2Q712K3 238 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 THEM5Q8N1Q8 247 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 PLD6Q8N2A8 252 aaKnown RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ELP4Q96EB1 424 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ZC3HAV1LQ96H79 300 aaKnown RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 SIGLEC11Q96RL6 698 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 P2RY13Q9BPV8 354 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 C1QTNF1Q9BXJ1 281 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 CCDC86Q9H6F5 360 aaKnown RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 H2AFY2Q9P0M6 372 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-203ENST00000372232 ADAM28Q9UKQ2 775 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 NEU3Q9UQ49 428 aa8.5□□□□□ -1.05
ATG4A-203ENST00000372232 COL4A4P53420 1690 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-203ENST00000372232 LOC390937A0A1W2PQ73 354 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 C2orf74A8MZ97 194 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 FXYD1O00168 92 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 PLATP00750 562 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 GHRHP01286 108 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 MT-ND1P03886 318 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 F11P03951 625 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 LCKP06239 509 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 APOA4P06727 396 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ACAA1P09110 424 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-203ENST00000372232 PRF1P14222 555 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CTPS1P17812 591 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 TYMPP19971 482 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CCND3P30281 292 aaPredicted RBP8.49□□□□□ -1.05
ATG4A-203ENST00000372232 SLC19A1P41440 591 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 PPP3CCP48454 512 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ATP4BP51164 291 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CAPZA1P52907 286 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CDH13P55290 713 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 HOXC5Q00444 222 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 TNP2Q05952 138 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 FGL1Q08830 312 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CERCAMQ5T4B2 595 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ZNF470Q6ECI4 717 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 RTL4Q6ZR62 310 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 C17orf107Q6ZR85 190 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 CCDC149Q6ZUS6 474 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 SLC46A3Q7Z3Q1 461 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 KLHL36Q8N4N3 616 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 BVESQ8NE79 360 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
ATG4A-203ENST00000372232 C10orf90Q96M02 699 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ZNF285Q96NJ3 590 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ZBTB18Q99592 522 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 RBBP8Q99708 897 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 MND1Q9BWT6 205 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 SIK2Q9H0K1 926 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 MLXQ9UH92 298 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 OGDHLQ9ULD0 1010 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 ING4Q9UNL4 249 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 MGAT4BQ9UQ53 548 aa8.49□□□□□ -1.05
ATG4A-203ENST00000372232 MAGED1Q9Y5V3 778 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms