RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ASF1AQ9Y294 204 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 CEP192Q8TEP8 1941 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 GNG14A0A1W2PPG7 69 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 G3V2T6 193 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 PLK4O00444 970 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 GNGT2O14610 69 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ETHE1O95571 254 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 SERPINA1P01009 418 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ALPLP05186 524 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 GSNP06396 782 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 IDSP22304 550 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 CXCR2P25025 360 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 CD27P26842 260 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 GSTT1P30711 240 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ALDH3B2P48448 385 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 DMPKQ09013 629 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 AGBL4Q5VU57 503 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ZNF776Q68DI1 518 aaPredicted RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 TMPRSS7Q7RTY8 843 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ZZZ3Q8IYH5 903 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 METTL4Q8N3J2 472 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 RNF175Q8N4F7 328 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 RAB42Q8N4Z0 105 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 BAHD1Q8TBE0 780 aaPredicted RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 ADAMTS16Q8TE57 1224 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 TEX101Q9BY14 249 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 RBM38Q9H0Z9 239 aaKnown RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 RMI1Q9H9A7 625 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 PAPOLBQ9NRJ5 636 aaKnown RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 ACSL5Q9ULC5 683 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 VPS4AQ9UN37 437 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 NCKAP1Q9Y2A7 1128 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 BTBD3Q9Y2F9 522 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 WBP11Q9Y2W2 641 aaKnown RBP13.46□□□□□ -0.25
LDB3-204ENST00000372066 GPSM3Q9Y4H4 160 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
LDB3-204ENST00000372066 DMXL2Q8TDJ6 3036 aa13.46□□□□□ -0.26
LDB3-204ENST00000372066 PLOD2O00469 737 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 KCNJ13O60928 360 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 SEMA3DO95025 777 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 MT-ND1P03886 318 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PTX3P26022 381 aaPredicted RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 GSTM5P46439 218 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RXRGP48443 463 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ROR2Q01974 943 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 PDE7AQ13946 482 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-204ENST00000372066 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 METRNLQ641Q3 311 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 MARCH9Q86YJ5 346 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 NATD1Q8N6N6 113 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 METTL25Q8N6Q8 603 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 FAM86B1Q8N7N1 296 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 OR5K2Q8NHB8 316 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 TFGQ92734 400 aaPredicted RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 GFM2Q969S9 779 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 NT5DC2Q9H857 520 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 CARS2Q9HA77 564 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 PRM3Q9NNZ6 103 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 C1orf226A1L170 272 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 GABRR3A8MPY1 467 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 MID1O15344 667 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 TNFSF14O43557 240 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 DPM1O60762 260 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 SNAP29O95721 258 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PCCBP05166 539 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 LAMP1P11279 417 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 MYCLP1P12525 358 aaPredicted RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 TTKP33981 857 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PEX19P40855 299 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RPS6KA3P51812 740 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 TAS2R38P59533 333 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ESRRGP62508 458 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PPP2R2BQ00005 443 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 CTBSQ01459 385 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 NKG7Q16617 165 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 WSCD2Q2TBF2 565 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ZC3H12BQ5HYM0 836 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 CATSPEREQ5SY80 951 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 CCNYL2Q5T2Q4 361 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 THEMIS2Q5TEJ8 643 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 RBM44Q6ZP01 1051 aaKnown RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 FAM83HQ6ZRV2 1179 aaPredicted RBP13.45□□□□□ -0.26
LDB3-204ENST00000372066 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 C17orf64Q86WR6 236 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
LDB3-204ENST00000372066 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms