RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 AZIN2Q96A70 460 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KLHL5Q96PQ7 755 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 AHCYP23526 432 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PSMB9P28065 219 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PPIGQ13427 754 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GLRA4Q5JXX5 417 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CORO6Q6QEF8 472 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CYP20A1Q6UW02 462 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF486Q96H40 463 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SIRT7Q9NRC8 400 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GPRC5DQ9NZD1 345 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 UBL4AP11441 157 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 UGT2B7P16662 529 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MAKP20794 623 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TAS2R46P59540 309 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GTF2H3Q13889 308 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ARHGAP11BQ3KRB8 267 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ADGRF3Q8IZF5 1079 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TOMM5Q8N4H5 51 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF454Q8N9F8 522 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DOK4Q8TEW6 326 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EDEM1Q92611 657 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 A0A096LPK6 155 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 M0R143 59 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 BMP6P22004 513 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NFYAP23511 347 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SULT1E1P49888 294 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EMX2Q04743 252 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SLC9B2Q86UD5 537 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MAL2Q969L2 176 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SMARCD1Q96GM5 515 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DMRTB1Q96MA1 342 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TEX101Q9BY14 249 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DPH1Q9BZG8 443 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SP110Q9HB58 689 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SYT5O00445 386 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NOBOXO60393 691 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 UBXN7O94888 489 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ABLIM3O94929 683 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RELAQ04206 551 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NPRL3Q12980 569 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RAB30Q15771 203 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TRIM61Q5EBN2 209 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 NPAS3Q8IXF0 933 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RBMXL1Q96E39 390 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HMSDA8MTL9 139 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MSCO60682 206 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 AOC2O75106 756 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PMP2P02689 132 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LARS2Q15031 903 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 OR8H2Q8N162 312 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RBM14Q96PK6 669 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CDCA4Q9BXL8 241 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LMAN2LQ9H0V9 348 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CHRNA9Q9UGM1 479 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 FAM159BA6NKW6 160 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HSD17B7P56937 341 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PPATQ06203 517 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF362Q5T0B9 420 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 RNF220Q5VTB9 566 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMED4Q7Z7H5 227 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CLRN3Q8NCR9 226 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 S100A16Q96FQ6 103 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SH3YL1Q96HL8 342 aaPredicted RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EDEM2Q9BV94 578 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZCCHC11Q5TAX3 1644 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HS6ST1O60243 411 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PTHLHP12272 177 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MANEAQ5SRI9 462 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LHFPL5Q8TAF8 219 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 IFI44Q8TCB0 444 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 MFSD14AQ96MC6 490 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SFXN2Q96NB2 322 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 LDAHQ9H6V9 325 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GTSE1Q9NYZ3 720 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GGT3PA6NGU5 568 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EEF1E1-BLOC1S5C9J1V9 151 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 C9JVG2 144 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 EEF1E1O43324 174 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF30P17039 623 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 HTR1BP28222 390 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CMPK1P30085 196 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GGT2P36268 569 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ERVK-24P63145 666 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PGBD3Q8N328 593 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 PIGXQ8TBF5 258 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 SLC29A1Q99808 456 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF251Q9BRH9 671 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ASF1BQ9NVP2 202 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM221A6NGB7 291 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 DARSP14868 501 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 KLRC1P26715 233 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 GPC1P35052 558 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 TSFMP43897 325 aaKnown RBP3.63□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF132P52740 706 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CHRNA6Q15825 494 aa3.63□□□□□ -1.83
SYNE1-207ENST00000367255 CHSY3Q70JA7 882 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms