RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LDB2O43679 373 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 PPM1BO75688 479 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 RLN1P04808 185 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 IL3P08700 152 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 ARHGDIBP52566 201 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 MEF2AQ02078 507 aaPredicted RBP12.96□□□□□ -0.34
LDB3-202ENST00000361373 FGF13Q92913 245 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 RNF121Q9H920 327 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 FBRSL1Q9HCM7 1045 aaKnown RBP12.96□□□□□ -0.34
LDB3-202ENST00000361373 CEBPBP17676 345 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 HTR1EP28566 365 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 CD47Q08722 323 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 C1orf61Q13536 156 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 PCBP2Q15366 365 aaKnown RBP eCLIP12.96□□□□□ -0.34
LDB3-202ENST00000361373 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 RABL3Q5HYI8 236 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 NANOGP8Q6NSW7 305 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 GALNT12Q8IXK2 581 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 FAM174AQ8TBP5 190 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 PITHD1Q9GZP4 211 aaPredicted RBP12.96□□□□□ -0.34
LDB3-202ENST00000361373 NANOGQ9H9S0 305 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 ARNT2Q9HBZ2 717 aa12.96□□□□□ -0.34
LDB3-202ENST00000361373 SLC22A1O15245 554 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 SEMA3DO95025 777 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 STATHP02808 62 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
LDB3-202ENST00000361373 MAP3K8P41279 467 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 CDKN1CP49918 316 aaPredicted RBP12.95□□□□□ -0.34
LDB3-202ENST00000361373 DMPKQ09013 629 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 ZNF234Q14588 700 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 DEFB134Q4QY38 66 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 MEDAGQ5VYS4 303 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 GPALPP1Q8IXQ4 340 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 MCM8Q9UJA3 840 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 PTBP2Q9UKA9 531 aaKnown RBP12.95□□□□□ -0.34
LDB3-202ENST00000361373 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 AREL1O15033 823 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TBX10O75333 385 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 RAB36O95755 333 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 HHEXQ03014 270 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 VMACQ2NL98 169 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 CCDC116Q8IYX3 515 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 ZSCAN1Q8NBB4 408 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 ACVR1CQ8NER5 493 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 OR6N1Q8NGY5 312 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TGM7Q96PF1 710 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 CMKLR1Q99788 373 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 IL26Q9NPH9 171 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TRIM36Q9NQ86 728 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 DKKL1Q9UK85 242 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TAS2R43P59537 309 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 CLEC12AQ5QGZ9 265 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 RNF111Q6ZNA4 994 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 AQP11Q8NBQ7 271 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 FAR1Q8WVX9 515 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 HYAL2Q12891 473 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
LDB3-202ENST00000361373 FAM86B1Q8N7N1 296 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 NUP43Q8NFH3 380 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 STON2Q8WXE9 905 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TMEM74Q96NL1 305 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 LMAN1LQ9HAT1 526 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 PREBQ9HCU5 417 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
LDB3-202ENST00000361373 A0A1W2PRG6 482 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 CLDN25C9JDP6 229 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 BTAF1O14981 1849 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 EEDO75530 441 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 CLEC3AO75596 197 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 NR4A1P22736 598 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 RORCP51449 518 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 ACY1Q03154 408 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 E2F2Q14209 437 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 PLCH1Q4KWH8 1693 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 FIGLAQ6QHK4 219 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 SLC45A3Q96JT2 553 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 HS6ST2Q96MM7 605 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZNF222Q9UK12 451 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZNF451Q9Y4E5 1061 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 PORP16435 677 aaPredicted RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 HK1P19367 917 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ITIH1P19827 911 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ARHGAP19Q14CB8 494 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZNF648Q5T619 568 aaPredicted RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 OR4C11Q6IEV9 310 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 RPS27LQ71UM5 84 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 OR5T3Q8NGG3 340 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ADAD1Q96M93 576 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZFR2Q9UPR6 939 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms