RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 VSX2P58304 361 aaPredicted RBP17.74■□□□□ 0.43
SHANK1-202ENST00000359082 MVKQ03426 396 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 FAM189A2Q15884 450 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 ZNF678Q5SXM1 525 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 TPRG1Q6ZUI0 275 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 HMGN2P46Q86SG4 172 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 CILP2Q8IUL8 1156 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 PHC2Q8IXK0 858 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 PADI2Q9Y2J8 665 aa17.74■□□□□ 0.43
SHANK1-202ENST00000359082 SYNGR4O95473 234 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 PMS2P3Q13401 168 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 EIF5AL1Q6IS14 154 aaKnown RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OTUB2Q96DC9 234 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 ATG5Q9H1Y0 275 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OR10A4Q9H209 315 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 ZNF701Q9NV72 531 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 SFTPBP07988 381 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 POU6F2P78424 691 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 MSS51Q4VC12 460 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 PDSS2Q86YH6 399 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 DNAAF1Q8NEP3 725 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 PTGES2Q9H7Z7 377 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 TUBA1BP68363 451 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 TUBA1AQ71U36 451 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 VTCN1Q7Z7D3 282 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 LAS2Q8IYD9 372 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 MMABQ96EY8 250 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 FZD3Q9NPG1 666 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 TDP1Q9NUW8 608 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 BHMG1C9JSJ3 638 aaPredicted RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OR12D1P0DN82 309 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 GLDCP23378 1020 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 AIMP2Q13155 320 aaKnown RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OSTM1Q86WC4 334 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OR4K1Q8NGD4 311 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 OR51G2Q8NGK0 314 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 SLC6A7Q99884 636 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 MEAF6Q9HAF1 191 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 MRC1P22897 1456 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 RICTORQ6R327 1708 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 A0A1W2PPK0 400 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 ZNF860A6NHJ4 632 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 SLC19A2O60779 497 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 ADH1BP00325 375 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 PCLAFQ15004 111 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 MR1Q95460 341 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 SEZ6LQ9BYH1 1024 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 LIN28AQ9H9Z2 209 aaKnown RBP17.73■□□□□ 0.43
SHANK1-202ENST00000359082 TLR9Q9NR96 1032 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
SHANK1-202ENST00000359082 NPIPA2E9PIF3 369 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 NPIPA3F8WFD2 350 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 CAPN5O15484 640 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-202ENST00000359082 UQCRC2P22695 453 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 SGCAQ16586 387 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 UBE2Q1Q7Z7E8 422 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 MTMR14Q8NCE2 650 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 ABHD5Q8WTS1 349 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 AURKBQ96GD4 344 aaPredicted RBP17.72■□□□□ 0.43
SHANK1-202ENST00000359082 NSUN3Q9H649 340 aaKnown RBP17.72■□□□□ 0.43
SHANK1-202ENST00000359082 NOTOA8MTQ0 251 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 LRRN3E7EW58 273 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GPRC6AQ5T6X5 926 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 SHDQ96IW2 340 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 LRRN3Q9H3W5 708 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 IL21RQ9HBE5 538 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 POLE4Q9NR33 117 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 ASB6Q9NWX5 421 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 NUFIP1Q9UHK0 495 aaKnown RBP17.72■□□□□ 0.43
SHANK1-202ENST00000359082 DLGAP4Q9Y2H0 992 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 WDR45Q9Y484 360 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GATMP50440 423 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GTF2IRD2BQ6EKJ0 949 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 TMEM225Q6GV28 225 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 ERMP1Q7Z2K6 904 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GTF2IRD2Q86UP8 949 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GALNT12Q8IXK2 581 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 MCHR1Q99705 422 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 XKR8Q9H6D3 395 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 KCNN3Q9UGI6 736 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 SCP2D1Q9UJQ7 156 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 A0A1W2PP18 115 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 F8A1P23610 371 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 SLC26A5P58743 744 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 DNAJB4Q9UDY4 337 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GRID2O43424 1007 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 MAP2K4P45985 399 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 OGDHQ02218 1023 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 TUBA3CQ13748 450 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 TRAM2Q15035 370 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 TIGARQ9NQ88 270 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 LRRC42Q9Y546 428 aa17.72■□□□□ 0.43
SHANK1-202ENST00000359082 GTF2F2P13984 249 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 GABRA3P34903 492 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 CD97P48960 835 aa17.71■□□□□ 0.43
SHANK1-202ENST00000359082 VMACQ2NL98 169 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms