RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PLD4Q96BZ4 506 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 OR5B2Q96R09 309 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PEBP4Q96S96 227 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF350Q9GZX5 532 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 FSCN3Q9NQT6 498 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 H2BFMP0C1H6 154 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PTGER3P43115 390 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 LSSP48449 732 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 EPHA4P54764 986 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ERVFC1P60507 584 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 DSC1Q08554 894 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 MSS51Q4VC12 460 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RFLNAQ6ZTI6 216 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CDHR3Q6ZTQ4 885 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 OR52E2Q8NGJ4 325 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 FAM174AQ8TBP5 190 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CCDC107Q8WV48 283 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 POLDIP3Q9BY77 421 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZFR2Q9UPR6 939 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 TEX13DA0A0J9YY54 714 aaPredicted RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RGS10O43665 173 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 AIREO43918 545 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 C8GP07360 202 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RPL3P39023 403 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CRISP3P54108 245 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ERN2Q76MJ5 926 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF461Q8TAF7 563 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 MAL2Q969L2 176 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CMTM7Q96FZ5 175 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 HOPXQ9BPY8 73 aaPredicted RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 S100A14Q9HCY8 104 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 HSFX1Q9UBD0 423 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RUVBL1Q9Y265 456 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 DNM1LO00429 736 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PSMB5P28074 263 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 GRB7Q14451 532 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF527Q8NB42 609 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 HS6ST2Q96MM7 605 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 SERINC2Q96SA4 455 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ADAMTS10Q9H324 1103 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PDE7BQ9NP56 450 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 B3GALT1Q9Y5Z6 326 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 A0A0A6YYH2 397 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 A6NJ64 397 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 A8MT66 165 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 GYPBP06028 91 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 EEF1A1P68104 462 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PLP2Q04941 152 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF565Q8N9K5 539 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 WWTR1Q9GZV5 400 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 FKRPQ9H9S5 495 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF355PQ9NSJ1 428 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 P2RX2Q9UBL9 471 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 M0R129 80 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PNLIPRP1P54315 467 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 TGFBIQ15582 683 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 BMT2Q1RMZ1 405 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CCNJQ5T5M9 372 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 TMEM64Q6YI46 380 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 IGDCC3Q8IVU1 814 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 LGI4Q8N135 537 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 C7orf34Q96L11 122 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 DPH2Q9BQC3 489 aaPredicted RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ANKRA2Q9H9E1 313 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 LRIT1Q9P2V4 623 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CNTN6Q9UQ52 1028 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 SEMA4FO95754 770 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 NPR2P20594 1047 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CPOXP36551 454 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 CASP6P55212 293 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 VBP1P61758 197 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZP2Q05996 745 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 TRAP1Q12931 704 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 SHHQ15465 462 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF227Q86WZ6 799 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 METTL2AQ96IZ6 378 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 RPF2Q9H7B2 306 aaKnown RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PPP4R1LQ9P1A2 415 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 FBXO9Q9UK97 447 aaPredicted RBP7.08□□□□□ -1.28
VPS13A-202ENST00000357409 PCDHGB5Q9Y5G0 923 aa7.08□□□□□ -1.28
VPS13A-202ENST00000357409 FAM230AA0A1W2PPH8 454 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EFCAB9A8MZ26 197 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EEF1E1-BLOC1S5C9J1V9 151 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EEF1E1O43324 174 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PSMA1P25786 263 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 B3GLCTQ6Y288 498 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 DEFB123Q8N688 67 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC7A6OSQ96CW6 309 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF649Q9BS31 505 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MMADHCQ9H3L0 296 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CYTH4Q9UIA0 394 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TMEM5Q9Y2B1 443 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NOP16Q9Y3C1 178 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PCDHB14Q9Y5E9 798 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms