RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SMOXQ9NWM0 555 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 FZD10Q9ULW2 581 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 YDJCA8MPS7 323 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 C4BPAP04003 597 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF20P17024 532 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PCGF2P35227 344 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 MECP2P51608 486 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 BTG1P62324 171 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 MAD2L1BPQ15013 274 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ACTBL2Q562R1 376 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF613Q6PF04 617 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OMDQ99983 421 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 C19orf43Q9BQ61 176 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 TTPALQ9BTX7 342 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CDADC1Q9BWV3 514 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 KCNIP2Q9NS61 270 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 MED1Q15648 1581 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 A8MT66 165 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GPRIN2O60269 458 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RBBP9O75884 186 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CSF3P09919 207 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF132P52740 706 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CLDN10P78369 228 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ARHGAP19Q14CB8 494 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SMAD1Q15797 465 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF529Q6P280 563 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 KCTD20Q7Z5Y7 419 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 DCUN1D3Q8IWE4 304 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 REM2Q8IYK8 340 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RNF128Q8TEB7 428 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 OVCA2Q8WZ82 227 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SLC25A11Q02978 314 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CHDHQ8NE62 594 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PMM1Q92871 262 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 COG8Q96MW5 612 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 MGLLQ99685 303 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 G6PC3Q9BUM1 346 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RIMBP3CA6NJZ7 1639 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RIMBP3BA6NNM3 1639 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RIMBP3Q9UFD9 1639 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SNAP29O95721 258 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SRCP12931 536 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CD53P19397 219 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 TAS2R39P59534 338 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SLC36A3Q495N2 470 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 NANOGP8Q6NSW7 305 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PHTF2Q8N3S3 785 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SAMD12Q8N8I0 201 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ACER1Q8TDN7 264 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 EDEM1Q92611 657 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 NANOGQ9H9S0 305 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 POLQO75417 2590 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZNF670-ZNF695F2Z2N8 137 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 F10P00742 488 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RAB40ALP0C0E4 278 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 GDI2P50395 445 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PPP1R26Q5T8A7 1209 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CNTN4Q8IWV2 1026 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ARMC10Q8N2F6 343 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 AQP11Q8NBQ7 271 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 CHTF18Q8WVB6 975 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RAB40AQ8WXH6 277 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 ZFP3Q96NJ6 502 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 URM1Q9BTM9 101 aaKnown RBP6.35□□□□□ -1.39
VPS13B-202ENST00000357162 PIGMQ9H3S5 423 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 RNF121Q9H920 327 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 TREM1Q9NP99 234 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 SLC35C2Q9NQQ7 365 aa6.35□□□□□ -1.39
VPS13B-202ENST00000357162 IGKV6D-41A0A0C4DH26 115 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 FAM155BO75949 473 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 FLI1Q01543 452 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 RPA4Q13156 261 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 XKR5Q6UX68 686 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 ADAMTS14Q8WXS8 1223 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 MFSD3Q96ES6 412 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 C16orf58Q96GQ5 468 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 FCRL1Q96LA6 429 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 DMRTB1Q96MA1 342 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 TAPBPLQ9BX59 468 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 BCL2L14Q9BZR8 327 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 COL2A1P02458 1487 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 LATS1O95835 1130 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 NELFEP18615 380 aaKnown RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 RAB3AP20336 220 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 BLKP51451 505 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 ZFAND4Q86XD8 727 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 SIGLEC10Q96LC7 697 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 C11orf16Q9NQ32 467 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 ZNFX1Q9P2E3 1918 aaKnown RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 F5H0A9 414 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 TNFRSF10AO00220 468 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 SCAF4O95104 1147 aaKnown RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 SNTB2Q13425 540 aaKnown RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 C3orf38Q5JPI3 329 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 PAPD5Q8NDF8 572 aaKnown RBP6.34□□□□□ -1.39
VPS13B-202ENST00000357162 SCML1Q9UN30 329 aa6.34□□□□□ -1.39
VPS13B-202ENST00000357162 MT-CO2P00403 227 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms