RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MRPL15Q9P015 296 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 SLC2A1P11166 492 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ATP1B2P14415 290 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 IRF9Q00978 393 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 LRRN1Q6UXK5 716 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 TFGQ92734 400 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 CMTM7Q96FZ5 175 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 PCDHAC1Q9H158 963 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 SERPINA7P05543 415 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 EEFSECP57772 596 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 YBEYP58557 167 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 TRIM46Q7Z4K8 759 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 C1orf52Q8N6N3 182 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 GEMIN6Q8WXD5 167 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 OSTF1Q92882 214 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 RRNAD1Q96FB5 475 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 TPT1P8Q9HAU6 139 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 TLR4O00206 839 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ADORA3P0DMS8 318 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 CHRNA4P43681 627 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF619Q8N2I2 560 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 ZBTB20Q9HC78 741 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 SRA1Q9HD15 236 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 KCNIP1Q9NZI2 227 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 OR6C74A6NCV1 312 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 H0Y8G0 127 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 HMGN1P05114 100 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 NDUFS1P28331 727 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 SFTPDP35247 375 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 RBMXP38159 391 aaKnown RBP16.67■□□□□ 0.26
COL27A1-201ENST00000356083 CHRNEQ04844 493 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 LGI4Q8N135 537 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 DNAJB11Q9UBS4 358 aa16.67■□□□□ 0.26
COL27A1-201ENST00000356083 CCL5P13501 91 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 OR1E2P47887 323 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 MON1BQ7L1V2 547 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 LYSMD3Q7Z3D4 306 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 UNC93B1Q9H1C4 597 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 GPR34Q9UPC5 381 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 FAM170BA6NMN3 283 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 EPCAMP16422 314 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 NDST2P52849 883 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 EEF1A2Q05639 463 aaKnown RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 NPRL3Q12980 569 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 RAB30Q15771 203 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 DUSP28Q4G0W2 176 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PAMR1Q6UXH9 720 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 LNX1Q8TBB1 728 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF431Q8TF32 576 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 C22orf15Q8WYQ4 148 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TSACCQ96A04 125 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 CIDECQ96AQ7 238 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 CCM2Q9BSQ5 444 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 KATNBL1Q9H079 304 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 OR51I1Q9H343 314 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 LCN1P31025 176 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PHC1P78364 1004 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF584Q8IVC4 421 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ARHGAP12Q8IWW6 846 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ASB15Q8WXK1 588 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TP53TG5Q9Y2B4 290 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PREX2Q70Z35 1606 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 EDDM13A0A1B0GTR0 161 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TOXO94900 526 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 RNF220Q5VTB9 566 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 STEAP3Q658P3 488 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PRELID2Q8N945 189 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 GOLM1Q8NBJ4 401 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 SLC13A3Q8WWT9 602 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TM9SF4Q92544 642 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 HERPUD2Q9BSE4 406 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 NAA11Q9BSU3 229 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PSMD10O75832 226 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PET100P0DJ07 73 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TPTEP56180 551 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 SVOPLQ8N434 492 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 CELF5Q8N6W0 485 aaKnown RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 FBXL8Q96CD0 374 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 SLC6A16Q9GZN6 736 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PDE7BQ9NP56 450 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 PRKD3O94806 890 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 C6P13671 934 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 C3orf38Q5JPI3 329 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 OR4F3Q6IEY1 312 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF761Q86XN6 746 aaPredicted RBP16.66■□□□□ 0.26
COL27A1-201ENST00000356083 SLC43A2Q8N370 569 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 CLEC4CQ8WTT0 213 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 TAMM41Q96BW9 452 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ACTR6Q9GZN1 396 aa16.66■□□□□ 0.26
COL27A1-201ENST00000356083 ZNF254O75437 659 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 SPIN4Q56A73 249 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 TAC4Q86UU9 113 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 PGAM4Q8N0Y7 254 aa16.65■□□□□ 0.26
COL27A1-201ENST00000356083 SNIP1Q8TAD8 396 aaKnown RBP16.65■□□□□ 0.26
COL27A1-201ENST00000356083 GAB3Q8WWW8 586 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms