RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 ATP1A1-AS1Q5TC04 95 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 SRFBP1Q8NEF9 429 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 FKBP10Q96AY3 582 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 GPR87Q9BY21 358 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 CPNE5Q9HCH3 593 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 PSD3Q9NYI0 1048 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 KCND3Q9UK17 655 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 TCFL5Q9UL49 500 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 PPT2Q9UMR5 302 aa16.9■□□□□ 0.3
PDLIM7-202ENST00000355841 A0A087WV48 116 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 B3GALT2O43825 422 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 SKAP2O75563 359 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 BSGP35613 385 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 KLC1Q07866 573 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 TBL3Q12788 808 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 CSTF3Q12996 717 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 ZC3H7AQ8IWR0 971 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 DDIASQ8IXT1 998 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 CA13Q8N1Q1 262 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 TWIST2Q8WVJ9 160 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 STARD8Q92502 1023 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 SERINC2Q96SA4 455 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 SPSB2Q99619 263 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 MESP1Q9BRJ9 268 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 ILKAPQ9H0C8 392 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 SLC26A1Q9H2B4 701 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 MKKSQ9NPJ1 570 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 PNPOQ9NVS9 261 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 VPS29Q9UBQ0 182 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 RAP2CQ9Y3L5 183 aa16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 MAP1BP46821 2468 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-202ENST00000355841 A0A088AWK7 358 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 VSTM2BA6NLU5 285 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 PIP5K1BO14986 540 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 NKX2-8O15522 239 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SNNO75324 88 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 BMP10O95393 424 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 ALBP02768 609 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 JUNP05412 331 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 KLK1P06870 262 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 UMODP07911 640 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 PRKAR1AP10644 381 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 ZNF10P21506 573 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 EFNA3P52797 238 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SKP1P63208 163 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 IL10RAQ13651 578 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SPDYAQ5MJ70 313 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 MFSD4BQ5TF39 518 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 ATG16L1Q676U5 607 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 COMMD6Q7Z4G1 85 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 C1orf52Q8N6N3 182 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 OR2T11Q8NH01 316 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 APIPQ96GX9 242 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 PPP1R36Q96LQ0 422 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 MAPKAP1Q9BPZ7 522 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 THAP1Q9NVV9 213 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SSUH2Q9Y2M2 353 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 PCDHGA6Q9Y5G7 932 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 CCDC88CQ9P219 2028 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 DSPP15924 2871 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 IGLV3-12A0A075B6K2 115 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SRRM3A6NNA2 597 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 TMPRSS11DO60235 418 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 CREG1O75629 220 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SEMA3DO95025 777 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 CHEK2O96017 543 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 HSD3B1P14060 373 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 HSD3B2P26439 372 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 LIM2P55344 173 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SLAMF1Q13291 335 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 IMPG1Q17R60 797 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 MINDY4Q4G0A6 757 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 RIPOR1Q6ZS17 1223 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 TRIM42Q8IWZ5 723 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 METTL4Q8N3J2 472 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 FAM47BQ8NA70 645 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 OR2Y1Q8NGV0 311 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 SLC45A3Q96JT2 553 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 CSF3RQ99062 836 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 WDR54Q9H977 334 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 MARCOQ9UEW3 520 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 FBXW2Q9UKT8 454 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 PADI2Q9Y2J8 665 aa16.88■□□□□ 0.29
PDLIM7-202ENST00000355841 B4GALT2O60909 372 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 FURINP09958 794 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 KITP10721 976 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 FOLR3P41439 243 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 RPL14P50914 215 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 OCRLQ01968 901 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 PDCD2Q16342 344 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 FAAH2Q6GMR7 532 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 NIPAL1Q6NVV3 410 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 CCDC81Q6ZN84 652 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 RAB3IL1Q8TBN0 382 aa16.87■□□□□ 0.29
PDLIM7-202ENST00000355841 LRRC8CQ8TDW0 803 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms