RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PDZK1Q5T2W1 519 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 DDI2Q5TDH0 399 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 DNM1P34Q6PK57 102 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RNF130Q86XS8 419 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PLD6Q8N2A8 252 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 NUP43Q8NFH3 380 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 HUS1BQ8NHY5 278 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ZNF570Q96NI8 536 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 EDEM2Q9BV94 578 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 C11orf16Q9NQ32 467 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ANKRD31Q8N7Z5 1873 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 HYKKA2RU49 373 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 NPIPA2E9PIF3 369 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 NPIPA3F8WFD2 350 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 BLOC1S5-TXNDC5H3BN57 136 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 M0QX08 132 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 CASKO14936 926 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RSL1D1O76021 490 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 SERPINA3P01011 423 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 OMPP47874 163 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PGGT1BP53609 377 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ADAM15Q13444 863 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PDCD4Q53EL6 469 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 MANEALQ5VSG8 457 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ARL10Q8N8L6 244 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 OR14L1PQ8NHC6 308 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 SMIM14Q96QK8 99 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 EBF4Q9BQW3 602 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 HDAC8Q9BY41 377 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 BRD7Q9NPI1 651 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 POT1Q9NUX5 634 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 CDH22Q9UJ99 828 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RREB1Q92766 1687 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TRBC2A0A5B9 178 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 SCRG1O75711 98 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 EMX2Q04743 252 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 ABHD18Q0P651 414 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 TCEAL6Q6IPX3 200 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 KDELC1Q6UW63 502 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 GALNT10Q86SR1 603 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RBM15BQ8NDT2 890 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 DENND6BQ8NEG7 585 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 NLGN4YQ8NFZ3 816 aaPredicted RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 RHEBL1Q8TAI7 183 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 NSUN5Q96P11 429 aaKnown RBP9.32□□□□□ -0.92
GABPA-201ENST00000354828 ZNF347Q96SE7 839 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 LRMDAQ9H2I8 198 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 OR6C2Q9NZP2 312 aa9.32□□□□□ -0.92
GABPA-201ENST00000354828 RDH16O75452 317 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 TNFAIP8O95379 198 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 ECDO95905 644 aaPredicted RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 ENDOUP21128 410 aaKnown RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 FDXRP22570 491 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 RNF144AP50876 292 aaPredicted RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 NOVA1P51513 510 aaKnown RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 HK3P52790 923 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 PLP2Q04941 152 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 PKDCCQ504Y2 493 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 KLHL26Q53HC5 615 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 SLC2A7Q6PXP3 512 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 ABRAXAS1Q6UWZ7 409 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 FRMD7Q6ZUT3 714 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 TMPRSS9Q7Z410 1059 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 CGREF1Q99674 301 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 SLC12A9Q9BXP2 914 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 CD248Q9HCU0 757 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 GIMAP2Q9UG22 337 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 IQCMA0A1B0GVH7 501 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 FARS2O95363 451 aaKnown RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 CBLP22681 906 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 RBPJQ06330 500 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 TMEM107Q6UX40 140 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 CEP97Q8IW35 865 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 OR5P2Q8WZ92 322 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 CDC6Q99741 560 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 LRRC3Q9BY71 257 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 POLR2J3Q9H1A7 115 aaKnown RBP9.31□□□□□ -0.92
GABPA-201ENST00000354828 TM7SF3Q9NS93 570 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 NKIRAS2Q9NYR9 191 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 GPRC5BQ9NZH0 403 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 MYH10P35580 1976 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 A0A087WXM4 84 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 FAM149AA5PLN7 773 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 SGK494L7N484 410 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 PLD2O14939 933 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 EMC8O43402 210 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 UGT2B11O75310 529 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 DLGAP3O95886 979 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 HSD3B1P14060 373 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 IL9P15248 144 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 RPS3P23396 243 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABPA-201ENST00000354828 HSD3B2P26439 372 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 XCR1P46094 333 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 MC1RQ01726 317 aa9.31□□□□□ -0.92
GABPA-201ENST00000354828 CRB2Q5IJ48 1285 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms