RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CDC20Q12834 499 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 EFR3AQ14156 821 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SIM2Q14190 667 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 GAS6Q14393 721 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 ATP6AP1Q15904 470 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 ADAMTSL2Q86TH1 951 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 HORMAD1Q86X24 394 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 PHYKPLQ8IUZ5 450 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 UBQLNLQ8IYU4 475 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 C8orf59Q8N0T1 100 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-203ENST00000354674 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 EEF1AKMT1Q8WVE0 214 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 KIAA1191Q96A73 305 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 NELL2Q99435 816 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 MYOCQ99972 504 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 TUBA1CQ9BQE3 449 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 RASSF1Q9NS23 344 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 ACOXLQ9NUZ1 547 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 IKZF3Q9UKT9 509 aa9.7□□□□□ -0.86
SYNE1-203ENST00000354674 CCDC182A6NF36 153 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 EFCAB9A8MZ26 197 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 LOC110117498-PIK3R3F6TDL0 507 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 QSOX1O00391 747 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 DLX3O60479 287 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 LILRB5O75023 590 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 OR2B3O76000 313 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 RASAL1O95294 804 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 FTH1P02794 183 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CD36P16671 472 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 AOAHP28039 575 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TRIM23P36406 574 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 DNAJB13P59910 316 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 IL2P60568 153 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 GALEQ14376 348 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 INPP5AQ14642 412 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 WSCD2Q2TBF2 565 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 GARNL3Q5VVW2 1013 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CLEC6AQ6EIG7 209 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 THAP5Q7Z6K1 395 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 RASGEF1AQ8N9B8 481 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 PLA2G15Q8NCC3 412 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 HMGCLL1Q8TB92 370 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 DYNC2LI1Q8TCX1 351 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 UBE2FQ969M7 185 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 BTBD2Q9BX70 525 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 OPTCQ9UBM4 332 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 A0A0B4J203 849 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 SMIM30A4D0T7 59 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 PCDH8O95206 1070 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 LDLRP01130 860 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 HSMCR30P0CW71 290 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CBSLP0DN79 551 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 GSTM2P28161 218 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CCR7P32248 378 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CBSP35520 551 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 GPR1P46091 355 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 PRLHRP49683 370 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TPMTP51580 245 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 NFKB2Q00653 900 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TMEM115Q12893 351 aaPredicted RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 SELPLGQ14242 412 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 OR4D1Q15615 310 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 C6orf141Q5SZD1 244 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 FIP1L1Q6UN15 594 aaKnown RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CYHR1Q6ZMK1 362 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 RETREG3Q86VR2 466 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CAMKK1Q8N5S9 505 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 ZBTB2Q8N680 514 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 YIPF7Q8N8F6 280 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 OR14C36Q8NHC7 312 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TEX101Q9BY14 249 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 SERHL2Q9H4I8 314 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CCM2LQ9NUG4 571 aaPredicted RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 ZFC3H1O60293 1989 aaKnown RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 COL6A3P12111 3177 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TOR1AO14656 332 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 ATG13O75143 517 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 H2AFYO75367 372 aaKnown RBP9.69□□□□□ -0.86
SYNE1-203ENST00000354674 MTX2O75431 263 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 SLITRK5O94991 958 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 PLATP00750 562 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 LIPMQ5VYY2 423 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 RAET1GQ6H3X3 334 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TRIM69Q86WT6 500 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 LINC00518Q8N0U6 118 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 CLDN23Q96B33 292 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 TNFRSF12AQ9NP84 129 aa9.69□□□□□ -0.86
SYNE1-203ENST00000354674 ATG2BQ96BY7 2078 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 AGAP5A6NIR3 686 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 HS6ST1O60243 411 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 KLK8O60259 260 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 KERAO60938 352 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 ACADMP11310 421 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 MTHFD2P13995 350 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 DGKAP23743 735 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms